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对近交系小鼠品系的全基因组分析鉴定出一个包含 Ppar-gamma 的基因座,该基因座有助于提高疟疾的存活率。

Genome wide analysis of inbred mouse lines identifies a locus containing Ppar-gamma as contributing to enhanced malaria survival.

机构信息

Department of Cell Biology, The Scripps Research Institute, La Jolla, California, United States of America.

出版信息

PLoS One. 2010 May 28;5(5):e10903. doi: 10.1371/journal.pone.0010903.

Abstract

The genetic background of a patient determines in part if a person develops a mild form of malaria and recovers, or develops a severe form and dies. We have used a mouse model to detect genes involved in the resistance or susceptibility to Plasmodium berghei malaria infection. To this end we first characterized 32 different mouse strains infected with P. berghei and identified survival as the best trait to discriminate between the strains. We found a locus on chromosome 6 by linking the survival phenotypes of the mouse strains to their genetic variations using genome wide analyses such as haplotype associated mapping and the efficient mixed-model for association. This new locus involved in malaria resistance contains only two genes and confirms the importance of Ppar-gamma in malaria infection.

摘要

患者的遗传背景在一定程度上决定了一个人是否会发展出轻度疟疾并康复,或者是否会发展出严重的疟疾并死亡。我们使用了一种小鼠模型来检测与伯氏疟原虫(Plasmodium berghei)感染的抗性或易感性相关的基因。为此,我们首先对感染伯氏疟原虫的 32 种不同的小鼠品系进行了特征描述,并确定了生存率作为区分这些品系的最佳特征。我们使用全基因组分析,如单倍型关联作图和关联的高效混合模型,将小鼠品系的生存表型与其遗传变异联系起来,在 6 号染色体上发现了一个与疟疾抗性相关的基因座。这个新的基因座只包含两个基因,并证实了 Ppar-γ在疟疾感染中的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29c2/2878346/296314d7c1a3/pone.0010903.g001.jpg

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