National Centre of Excellence in Molecular Biology, University of the Punjab, 87 West Canal Bank Road, Lahore 53700, Pakistan.
Br J Ophthalmol. 2010 Aug;94(8):1094-9. doi: 10.1136/bjo.2009.171892. Epub 2010 Jun 10.
Retinitis pigmentosa (RP) is one of the most common ophthalmic disorders affecting one in approximately 5000 people worldwide. A nuclear family was recruited from the Punjab province of Pakistan to study the genetic basis of autosomal recessive RP.
All affected individuals underwent a thorough ophthalmic examination and the disease was characterised based upon results for fundus photographs and electroretinogram recordings. Genomic DNA was extracted from peripheral leucocytes. Exclusion studies were performed with short tandem repeat (STR) markers flanking reported autosomal recessive RP loci. Haplotypes were constructed and results were statistically evaluated.
The results of exclusion analyses suggested that family PKRP173 was linked to chromosome 2q harbouring mer tyrosine kinase protooncogene (MERTK), a gene previously associated with autosomal recessive RP. Additional STR markers refined the critical interval and placed it in a 13.4 cM (17 Mb) region flanked by D2S293 proximally and D2S347 distally. Significant logarithm of odds (LOD) scores of 3.2, 3.25 and 3.18 at theta=0 were obtained with markers D2S1896, D2S2269 and D2S160. Sequencing of the coding exons of MERTK identified a mutation, c.718G-->T in exon 4, which results in a premature termination of p.E240X that segregates with the disease phenotype in the family.
Our results strongly suggest that the nonsense mutation in MERTK, leading to premature termination of the protein, is responsible for RP phenotype in the affected individuals of the Pakistani family.
色素性视网膜炎(RP)是全球最常见的眼部疾病之一,每 5000 人中约有 1 人患病。一个巴基斯坦旁遮普省的核心家庭被招募来研究常染色体隐性遗传 RP 的遗传基础。
所有受影响的个体都接受了全面的眼科检查,根据眼底照片和视网膜电图记录的结果对疾病进行了特征描述。从外周白细胞中提取基因组 DNA。用短串联重复(STR)标记物对报道的常染色体隐性 RP 基因座进行排除研究。构建单体型并对结果进行统计学评估。
排除分析的结果表明,PKRP173 家族与 2q 染色体相关,该染色体携带有 mer 酪氨酸激酶原癌基因(MERTK),该基因先前与常染色体隐性 RP 相关。额外的 STR 标记物细化了关键区间,并将其置于近端由 D2S293 和远端由 D2S347 标记的 13.4 cM(17 Mb)区间内。在 theta=0 时,与标记物 D2S1896、D2S2269 和 D2S160 相关的显著对数优势(LOD)分数分别为 3.2、3.25 和 3.18。对 MERTK 的编码外显子进行测序,发现一个突变,c.718G-->T 位于 4 号外显子,导致 p.E240X 的过早终止,该突变与该家系中的疾病表型分离。
我们的结果强烈表明,MERTK 中的无义突变导致蛋白质的过早终止,是导致巴基斯坦家族受影响个体 RP 表型的原因。