Iqbal Muhammad, Naeem Muhammad Asif, Riazuddin S Amer, Ali Shahbaz, Farooq Tahir, Qazi Zaheeruddin A, Khan Shaheen N, Husnain Tayyab, Riazuddin Saima, Sieving Paul A, Hejtmancik J Fielding, Riazuddin Sheikh
National Center of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.
Arch Ophthalmol. 2011 Oct;129(10):1351-7. doi: 10.1001/archophthalmol.2011.267.
To identify pathogenic mutations responsible for autosomal recessive retinitis pigmentosa in 5 consanguineous Pakistani families.
Affected individuals in the families underwent a detailed ophthalmological examination that consisted of fundus photography and electroretinography. Blood samples were collected from all participating family members, and genomic DNA was extracted. A genome-wide linkage scan was performed, followed by exclusion analyses among our cohort of nuclear consanguineous families with microsatellite markers spanning the TULP1 locus on chromosome 6p. Two-point logarithm of odds scores were calculated, and all coding exons of TULP1 were sequenced bidirectionally.
The results of ophthalmological examinations among affected individuals in these 5 families were suggestive of retinitis pigmentosa. The genome-wide linkage scan localized the disease interval to chromosome 6p, harboring TULP1 in 1 of 5 families, and sequential analyses identified a single base pair substitution in TULP1 that results in threonine to alanine substitution (p.T380A). Subsequently, we investigated our entire cohort of families with autosomal recessive retinitis pigmentosa and identified 4 additional families with linkage to chromosome 6p, all of them harboring a single base pair substitution in TULP1 that results in lysine to arginine substitution (p.K489R). Results of single-nucleotide polymorphism haplotype analyses were suggestive of a common founder in these 4 families.
Pathogenic mutations in TULP1 are responsible for the autosomal recessive retinitis pigmentosa phenotype in these consanguineous Pakistani families, with a single ancestral mutation in TULP1 causing the disease phenotype in 4 of 5 families.
Clinical and molecular characterization of pathogenic mutations in TULP1 will increase our understanding of retinitis pigmentosa at a molecular level.
在5个巴基斯坦近亲家庭中鉴定导致常染色体隐性遗传性视网膜色素变性的致病突变。
对这些家庭中的患病个体进行详细的眼科检查,包括眼底照相和视网膜电图检查。采集所有参与研究的家庭成员的血样,提取基因组DNA。进行全基因组连锁扫描,随后在我们的核心近亲家庭队列中使用跨越6号染色体p臂上TULP1基因座的微卫星标记进行排除分析。计算两点对数优势分数,并对TULP1的所有编码外显子进行双向测序。
这5个家庭中患病个体的眼科检查结果提示为视网膜色素变性。全基因组连锁扫描将疾病区间定位到6号染色体p臂,5个家庭中有1个家庭的该区间包含TULP1基因,序列分析在TULP1中鉴定出一个单碱基对替换,导致苏氨酸替换为丙氨酸(p.T380A)。随后,我们调查了所有常染色体隐性遗传性视网膜色素变性家庭队列,又鉴定出4个与6号染色体p臂连锁的家庭,所有这些家庭的TULP1基因中均有一个单碱基对替换,导致赖氨酸替换为精氨酸(p.K489R)。单核苷酸多态性单倍型分析结果提示这4个家庭有一个共同的奠基者突变。
TULP1基因中的致病突变导致了这些巴基斯坦近亲家庭中的常染色体隐性遗传性视网膜色素变性表型,TULP1基因中的一个单一祖先突变导致了5个家庭中4个家庭出现疾病表型。
TULP1基因致病突变的临床和分子特征将增加我们在分子水平上对视网膜色素变性的理解。