Suppr超能文献

理论上的趋化反应和 E. coli 在弱趋化剂梯度中的漂移。

Theoretical results for chemotactic response and drift of E. coli in a weak attractant gradient.

机构信息

Department of Physics and Astrophysics, Delhi University, St. Stephen's College, Delhi 110007, India.

出版信息

J Theor Biol. 2010 Sep 7;266(1):99-106. doi: 10.1016/j.jtbi.2010.06.012. Epub 2010 Jun 15.

Abstract

The bacterium Escherichia coli (E. coli) moves in its natural environment in a series of straight runs, interrupted by tumbles which cause change of direction. It performs chemotaxis towards chemo-attractants by extending the duration of runs in the direction of the source. When there is a spatial gradient in the attractant concentration, this bias produces a drift velocity directed towards its source, whereas in a uniform concentration, E. coli adapts, almost perfectly in case of methyl aspartate. Recently, microfluidic experiments have measured the drift velocity of E. coli in precisely controlled attractant gradients, but no general theoretical expression for the same exists. With this motivation, we study an analytically soluble model here, based on the Barkai-Leibler model, originally introduced to explain the perfect adaptation. Rigorous mathematical expressions are obtained for the chemotactic response function and the drift velocity in the limit of weak gradients and under the assumption of completely random tumbles. The theoretical predictions compare favorably with experimental results, especially at high concentrations. We further show that the signal transduction network weakens the dependence of the drift on concentration, thus enhancing the range of sensitivity.

摘要

在其自然环境中,细菌大肠杆菌(E. coli)以一系列直线运动移动,运动过程中会被翻滚打断,从而导致方向发生变化。它通过在化学引诱剂源的方向上延长奔跑的时间来执行趋化作用。当引诱剂浓度存在空间梯度时,这种偏差会产生朝向其源的漂移速度,而在均匀浓度下,大肠杆菌会适应,在甲基天冬氨酸的情况下几乎是完美适应。最近,微流控实验已经在精确控制的引诱剂梯度下测量了大肠杆菌的漂移速度,但目前还没有针对这种情况的一般理论表达式。基于 Barkai-Leibler 模型,我们在这里研究了一个可分析求解的模型,该模型最初被引入以解释完美适应现象。我们在弱梯度极限和完全随机翻滚的假设下,得到了趋化响应函数和漂移速度的严格数学表达式。理论预测与实验结果非常吻合,特别是在高浓度下。我们进一步表明,信号转导网络减弱了漂移对浓度的依赖性,从而提高了灵敏度范围。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验