Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
J Struct Biol. 2010 Dec;172(3):372-9. doi: 10.1016/j.jsb.2010.06.018. Epub 2010 Jul 3.
Tm_Cel5A, which belongs to family 5 of the glycoside hydrolases, is an extremely stable enzyme among the endo-acting glycosidases present in the hyperthermophilic organism Thermotoga maritima. Members of GH5 family shows a common (β/α)(8) TIM-barrel fold in which the catalytic acid/base and nucleophile are located on strands β-4 and β-7 of the barrel fold. Thermally resistant cellulases are desirable for lignocellulosic biofuels production and the Tm_Cel5A is an excellent candidate for use in the degradation of polysaccharides present on biomass. This paper describes two Tm_Cel5A structures (crystal forms I and II) solved at 2.20 and 1.85Å resolution, respectively. Our analyses of the Tm_Cel5A structure and comparison to a mesophilic GH5 provides a basis for the thermostability associated with Tm_Cel5A. Furthermore, both crystal forms of Tm_Cel5A possess a cadmium (Cd(2+)) ion bound between the two catalytic residues. Activity assays of Tm_Cel5A confirmed a strong inhibition effect in the presence of Cd(2+) metal ions demonstrating competition with the natural substrate for the active site. Based on the structural information we have obtained for Tm_Cel5A, protein bioengineering can be used to potentially increase the thermostability of mesophilic cellulase enzymes.
Tm_Cel5A 属于糖苷水解酶家族 5,是嗜热古菌 Thermotoga maritima 中存在的内切糖苷酶中极其稳定的酶。GH5 家族的成员在其中展示出共同的(β/α)(8)TIM 桶状折叠,其中催化酸/碱和亲核试剂位于桶状折叠的β-4 和 β-7 链上。耐热纤维素酶是木质纤维素生物燃料生产所需要的,而 Tm_Cel5A 是用于降解生物质上存在的多糖的优秀候选酶。本文描述了两种 Tm_Cel5A 结构(晶型 I 和 II),分别在 2.20 和 1.85Å 分辨率下解析。我们对 Tm_Cel5A 结构的分析和与嗜温 GH5 的比较为 Tm_Cel5A 的热稳定性提供了基础。此外,Tm_Cel5A 的两种晶型都含有一个镉(Cd(2+))离子结合在两个催化残基之间。Tm_Cel5A 的活性测定证实了在存在 Cd(2+) 金属离子的情况下具有强烈的抑制作用,表明其与天然底物竞争活性位点。基于我们获得的 Tm_Cel5A 的结构信息,可以通过蛋白质生物工程来潜在地提高嗜温纤维素酶的热稳定性。