Department of Medicine and Epidemiology, University of California, Davis, CA 95616, USA.
Stat Med. 2010 Sep 10;29(20):2090-106. doi: 10.1002/sim.3975.
The receiver operating characteristic (ROC) curve is commonly used for evaluating the discriminatory ability of a biomarker. Measurements for a diagnostic test may be subject to an analytic limit of detection leading to immeasurable or unreportable test results. Ignoring the scores that are beyond the limit of detection of a test leads to a biased assessment of its discriminatory ability, as reflected by indices such as the associated area under the curve (AUC). We propose a Bayesian approach for the estimation of the ROC curve and its AUC for a test with a limit of detection in the absence of gold standard based on assumptions of normally and gamma-distributed data. The methods are evaluated in simulation studies, and a truncated gamma model with a point mass is used to evaluate quantitative real-time polymerase chain reaction data for bovine Johne's disease (paratuberculosis). Simulations indicated that estimates of diagnostic accuracy and AUC were good even for relatively small sample sizes (n=200). Exceptions were when there was a high per cent of unquantifiable results (60 per cent) or when AUC was < or =0.6, which indicated a marked overlap between the outcomes in infected and non-infected populations.
受试者工作特征(ROC)曲线通常用于评估生物标志物的判别能力。诊断性检测的测量结果可能受到分析检测下限的影响,导致无法测量或无法报告的检测结果。忽略检测限以外的分数会导致对其判别能力产生偏差评估,这反映在相关曲线下面积(AUC)等指标上。我们提出了一种贝叶斯方法,用于在没有金标准的情况下,基于正态和伽马分布数据的假设,对具有检测下限的检测进行 ROC 曲线及其 AUC 的估计。该方法在模拟研究中进行了评估,并使用截断伽马模型和点质量来评估牛副结核病(约翰氏病)的实时定量聚合酶链反应数据。模拟表明,即使对于相对较小的样本量(n=200),诊断准确性和 AUC 的估计也很好。例外情况是当无法量化的结果百分比较高(60%)或 AUC <或=0.6 时,这表明感染和非感染人群的结果之间存在明显重叠。