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基于转录组特征的人类子宫内膜容受性基因组诊断工具。

A genomic diagnostic tool for human endometrial receptivity based on the transcriptomic signature.

机构信息

Fundación IVI-Instituto Universitario IVI, University of Valencia, and Instituto de Investigación, Sanitaria del Hospital Clinico de Valencia, Valencia, Spain.

出版信息

Fertil Steril. 2011 Jan;95(1):50-60, 60.e1-15. doi: 10.1016/j.fertnstert.2010.04.063. Epub 2010 Jul 8.

Abstract

OBJECTIVE

To create a genomic tool composed of a customized microarray and a bioinformatic predictor for endometrial dating and to detect pathologies of endometrial origin. To define the transcriptomic signature of human endometrial receptivity.

DESIGN

Two cohorts of endometrial samples along the menstrual cycle were used: one to select the genes to be included in the customized microarray (endometrial receptivity array [ERA]), and the other to be analyzed by ERA to train the predictor for endometrial dating and to define the transcriptomic signature. A third cohort including pathological endometrial samples was used to train the predictor for pathological classification.

SETTING

Healthy oocyte donors and patients.

PATIENT(S): Healthy fertile women (88) and women with implantation failure (5) or hydrosalpinx (2).

INTERVENTION(S): Human endometrial biopsies.

MAIN OUTCOME MEASURE(S): The gene expression of endometrial biopsies.

RESULT(S): The ERA included 238 selected genes. The transcriptomic signature was defined by 134 genes. The predictor showed a specificity of 0.8857 and sensitivity of 0.99758 for endometrial dating, and a specificity of 0.1571 and a sensitivity of 0.995 for the pathological classification.

CONCLUSION(S): This diagnostic tool can be used clinically in reproductive medicine and gynecology. The transcriptomic signature is a potential endometrial receptivity biomarkers cluster.

摘要

目的

创建一个由定制微阵列和生物信息预测器组成的基因组工具,用于子宫内膜分期和检测子宫内膜来源的病变。定义人类子宫内膜容受性的转录组特征。

设计

使用两个月经周期的子宫内膜样本队列:一个用于选择要包含在定制微阵列(子宫内膜容受性阵列 [ERA])中的基因,另一个用于通过 ERA 分析以训练用于子宫内膜分期的预测器并定义转录组特征。第三个包括病理性子宫内膜样本的队列用于训练病理性分类的预测器。

设置

健康卵母细胞供体和患者。

患者

健康的有生育能力的女性(88 名)和植入失败(5 名)或输卵管积水(2 名)的女性。

干预措施

人类子宫内膜活检。

主要观察指标

子宫内膜活检的基因表达。

结果

ERA 包含 238 个选定的基因。转录组特征由 134 个基因定义。预测器显示出 0.8857 的特异性和 0.99758 的敏感性用于子宫内膜分期,特异性为 0.1571 和敏感性为 0.995 用于病理分类。

结论

该诊断工具可在生殖医学和妇科临床中使用。转录组特征是潜在的子宫内膜容受性生物标志物簇。

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