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一种用于分配芳香环共振和选择性鉴定蛋白质中天冬氨酸环共振的 15n 过滤的 2D 1H TOCSY 实验:描述和在光致变色黄色蛋白中的应用。

A 15n-filtered 2D 1H TOCSY experiment for assignment of aromatic ring resonances and selective identification of tyrosine ring resonances in proteins: Description and application to Photoactive Yellow Protein.

机构信息

Bijvoet Center for Biomolecular Research, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands.

出版信息

J Biomol NMR. 1997 Apr;9(3):313-6. doi: 10.1023/A:1018687127330.

DOI:10.1023/A:1018687127330
PMID:20680663
Abstract

A new method to selectively detect the ring resonances of the aromatic residues in 15N-labelled proteins is presented. The experiment consists of a 2D 1H TOCSY sequence withremoval of the amide signals via 15N-filtering. Experiments are acquired in the absence andpresence of water inversion; combining the two spectra allows selective observation of thetyrosine ring resonances and enables the identification of their delta andepsilon ring protons. The experiment is demonstrated on a 15N-labelled sample of Photoactive Yellow Protein and isshown to give good selectivity for tyrosine ring resonances under a wide range oftemperatures and pH values.

摘要

本文提出了一种新的方法,用于选择性地检测 15N 标记蛋白质中芳香族残基的环共振。该实验由二维 1H TOCSY 序列组成,通过 15N 过滤去除酰胺信号。实验在没有和存在水反转的情况下进行;将两个光谱结合起来,可以选择性地观察酪氨酸环共振,并能够识别它们的 δ 和 ε 环质子。该实验在光活性黄蛋白的 15N 标记样品上进行,并证明在较宽的温度和 pH 值范围内对酪氨酸环共振具有良好的选择性。

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本文引用的文献

1
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J Biomol NMR. 1996 Mar;7(2):99-106. doi: 10.1007/BF00203820.
2
The eubacterium Ectothiorhodospira halophila is negatively phototactic, with a wavelength dependence that fits the absorption spectrum of the photoactive yellow protein.嗜盐外硫红螺菌这种真细菌具有负趋光性,其波长依赖性符合光活性黄色蛋白的吸收光谱。
J Bacteriol. 1993 May;175(10):3096-104. doi: 10.1128/jb.175.10.3096-3104.1993.
3
Complete chemical structure of photoactive yellow protein: novel thioester-linked 4-hydroxycinnamyl chromophore and photocycle chemistry.
光活性黄色蛋白的完整化学结构:新型硫酯连接的4-羟基肉桂基发色团与光循环化学
Biochemistry. 1994 Dec 6;33(48):14369-77. doi: 10.1021/bi00252a001.
4
Thiol ester-linked p-coumaric acid as a new photoactive prosthetic group in a protein with rhodopsin-like photochemistry.硫醇酯连接的对香豆酸作为一种具有视紫红质样光化学性质的蛋白质中的新型光活性辅基。
Biochemistry. 1994 Nov 29;33(47):13959-62. doi: 10.1021/bi00251a001.
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1.4 A structure of photoactive yellow protein, a cytosolic photoreceptor: unusual fold, active site, and chromophore.1.4 光活性黄色蛋白的结构,一种胞质光感受器:异常折叠、活性位点和发色团。
Biochemistry. 1995 May 16;34(19):6278-87. doi: 10.1021/bi00019a004.
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Resonance Raman evidence that the thioester-linked 4-hydroxycinnamyl chromophore of photoactive yellow protein is deprotonated.
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