Department of Developmental Biology, Sloan-Kettering Institute, New York, NY 10065, USA.
Proc Natl Acad Sci U S A. 2010 Aug 24;107(34):15163-8. doi: 10.1073/pnas.1006432107. Epub 2010 Aug 10.
Canonical animal microRNAs (miRNAs) are generated by sequential cleavage of precursor substrates by the Drosha and Dicer RNase III enzymes. Several variant pathways exploit other RNA metabolic activities to generate functional miRNAs. However, all of these pathways culminate in Dicer cleavage, suggesting that this is a unifying feature of miRNA biogenesis. Here, we show that maturation of miR-451, a functional miRNA that is perfectly conserved among vertebrates, is independent of Dicer. Instead, structure-function and knockdown studies indicate that Drosha generates a short pre-mir-451 hairpin that is directly cleaved by Ago2 and followed by resection of its 3' terminus. We provide stringent evidence for this model by showing that Dicer knockout cells can generate mature miR-451 but not other miRNAs, whereas Ago2 knockout cells reconstituted with wild-type Ago2, but not Slicer-deficient Ago2, can process miR-451. Finally, we show that the mir-451 backbone is amenable to reprogramming, permitting vector-driven expression of diverse functional miRNAs in the absence of Dicer. Beyond the demonstration of an alternative strategy to direct gene silencing, these observations open the way for transgenic rescue of Dicer conditional knockouts.
经典的动物 microRNAs(miRNAs)是由 Drosha 和 Dicer RNase III 酶对前体底物的连续切割产生的。几种变体途径利用其他 RNA 代谢活性来产生功能性 miRNAs。然而,所有这些途径都以 Dicer 的切割为终点,这表明这是 miRNA 生物发生的一个统一特征。在这里,我们表明 miR-451 的成熟是独立于 Dicer 的,miR-451 是一种在脊椎动物中完全保守的功能性 miRNA。相反,结构-功能和敲低研究表明,Drosha 产生一个短的 pre-miR-451 发夹,该发夹被 Ago2 直接切割,然后切除其 3'末端。我们通过显示 Dicer 敲除细胞可以产生成熟的 miR-451 但不能产生其他 miRNAs,而用野生型 Ago2 重建但不是用 Slicer 缺陷型 Ago2 重建的 Ago2 敲除细胞可以处理 miR-451,为该模型提供了严格的证据。最后,我们表明 mir-451 骨架可以重新编程,允许在没有 Dicer 的情况下通过载体驱动表达多种功能性 miRNAs。除了证明了一种替代策略来直接进行基因沉默外,这些观察结果为 Dicer 条件性敲除的转基因拯救开辟了道路。