• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于特征的 DNA 条形码与生态学相结合的蜻蜓物种发现方法

An integrative approach to species discovery in odonates: from character-based DNA barcoding to ecology.

机构信息

ITZ, Ecology & Evolution, TiHo Hannover, Hannover, Germany.

出版信息

Mol Ecol. 2010 Sep;19(18):3881-93. doi: 10.1111/j.1365-294X.2010.04720.x.

DOI:10.1111/j.1365-294X.2010.04720.x
PMID:20701681
Abstract

Modern taxonomy requires an analytical approach incorporating all lines of evidence into decision-making. Such an approach can enhance both species identification and species discovery. The character-based DNA barcode method provides a molecular data set that can be incorporated into classical taxonomic data such that the discovery of new species can be made in an analytical framework that includes multiple sources of data. We here illustrate such a corroborative framework in a dragonfly model system that permits the discovery of two new, but visually cryptic species. In the African dragonfly genus Trithemis three distinct genetic clusters can be detected which could not be identified by using classical taxonomic characters. In order to test the hypothesis of two new species, DNA-barcodes from different sequence markers (ND1 and COI) were combined with morphological, ecological and biogeographic data sets. Phylogenetic analyses and incorporation of all data sets into a scheme called taxonomic circle highly supports the hypothesis of two new species. Our case study suggests an analytical approach to modern taxonomy that integrates data sets from different disciplines, thereby increasing the ease and reliability of both species discovery and species assignment.

摘要

现代分类学需要一种分析方法,将所有证据纳入决策过程中。这种方法可以提高物种鉴定和发现的能力。基于特征的 DNA 条码方法提供了一个分子数据集,可以与经典分类学数据结合使用,从而可以在包括多个数据源的分析框架中发现新物种。我们在这里以蜻蜓模型系统为例来说明这种相互印证的框架,该系统可以发现两种新的、但视觉上隐蔽的物种。在非洲蜻蜓属 Trithemis 中,可以检测到三个明显不同的遗传聚类,而这些聚类无法通过使用经典的分类学特征来识别。为了验证存在两个新物种的假设,我们将来自不同序列标记(ND1 和 COI)的 DNA 条码与形态学、生态学和生物地理学数据集结合起来进行测试。系统发育分析以及将所有数据集纳入一个称为分类学循环的方案强烈支持存在两个新物种的假设。我们的案例研究表明,一种现代分类学的分析方法可以整合来自不同学科的数据,从而提高物种发现和鉴定的准确性和可靠性。

相似文献

1
An integrative approach to species discovery in odonates: from character-based DNA barcoding to ecology.基于特征的 DNA 条形码与生态学相结合的蜻蜓物种发现方法
Mol Ecol. 2010 Sep;19(18):3881-93. doi: 10.1111/j.1365-294X.2010.04720.x.
2
The genus Drosophila as a model for testing tree- and character-based methods of species identification using DNA barcoding.利用 DNA 条形码技术对果蝇属进行基于树和特征的物种鉴定方法的测试模型。
Mol Phylogenet Evol. 2010 Nov;57(2):509-17. doi: 10.1016/j.ympev.2010.08.020. Epub 2010 Aug 25.
3
Limitations of mitochondrial gene barcoding in Octocorallia.线粒体基因条形码在八放珊瑚中的局限性。
Mol Ecol Resour. 2011 Jan;11(1):19-31. doi: 10.1111/j.1755-0998.2010.02875.x.
4
Integrating DNA barcode data and taxonomic practice: determination, discovery, and description.整合 DNA 条码数据与分类学实践:鉴定、发现和描述。
Bioessays. 2011 Feb;33(2):135-47. doi: 10.1002/bies.201000036.
5
Red drifters and dark residents: the phylogeny and ecology of a Plio-Pleistocene dragonfly radiation reflects Africa's changing environment (Odonata, Libellulidae, Trithemis).红色漂流者和暗黑居民:一个上新世-更新世蜻蜓辐射的系统发育和生态学反映了非洲环境的变化(蜻蜓目,蜻科,三痣绿浮蝽属)。
Mol Phylogenet Evol. 2010 Mar;54(3):870-82. doi: 10.1016/j.ympev.2009.12.006. Epub 2009 Dec 21.
6
Species-level diversification of African dwarf crocodiles (Genus Osteolaemus): a geographic and phylogenetic perspective.非洲侏儒鳄(侏儒鳄属)的物种水平多样化:地理和系统发育视角
Mol Phylogenet Evol. 2009 Mar;50(3):496-506. doi: 10.1016/j.ympev.2008.11.009. Epub 2008 Nov 21.
7
High mitochondrial diversity in geographically widespread butterflies of Madagascar: a test of the DNA barcoding approach.马达加斯加广泛分布的蝴蝶中存在高度线粒体多样性:对DNA条形码方法的一项测试
Mol Phylogenet Evol. 2009 Mar;50(3):485-95. doi: 10.1016/j.ympev.2008.11.008. Epub 2008 Nov 21.
8
COI barcoding of true bugs (Insecta, Heteroptera).COI 条形码技术在真昆虫(昆虫纲,半翅目)中的应用。
Mol Ecol Resour. 2011 Mar;11(2):266-70. doi: 10.1111/j.1755-0998.2010.02945.x. Epub 2010 Dec 2.
9
Phylogenetic relationships of Middle American cichlids (Cichlidae, Heroini) based on combined evidence from nuclear genes, mtDNA, and morphology.基于核基因、线粒体DNA和形态学的综合证据对中美洲丽鱼科鱼类(丽鱼科,英雄丽鱼属)的系统发育关系研究
Mol Phylogenet Evol. 2008 Dec;49(3):941-57. doi: 10.1016/j.ympev.2008.07.022. Epub 2008 Aug 7.
10
Convergent evolution of gigantism in damselflies of Africa and South America? Evidence from nuclear and mitochondrial sequence data.非洲和南美洲豆娘巨型化的趋同进化?来自核序列和线粒体序列数据的证据。
Mol Phylogenet Evol. 2007 Feb;42(2):339-46. doi: 10.1016/j.ympev.2006.05.040. Epub 2006 Jun 7.

引用本文的文献

1
Genetic diversity and phylogeographic patterns of the peacock jewel-damselfly, Rhinocypha fenestrella (Rambur, 1842).孔雀宝石蜻蜓 Rhinocypha fenestrella(Rambur,1842)的遗传多样性和系统地理格局。
PLoS One. 2024 Apr 5;19(4):e0301392. doi: 10.1371/journal.pone.0301392. eCollection 2024.
2
Coverage and quality of DNA barcode references for Central and Northern European Odonata.中欧和北欧蜻蜓目昆虫DNA条形码参考库的覆盖范围和质量
PeerJ. 2021 May 3;9:e11192. doi: 10.7717/peerj.11192. eCollection 2021.
3
Does the Dzungarian racerunner ( Orlova, Poyarkov, Chirikova, Nazarov, Munkhbaatar, Munkhbayar & Terbish, 2017) occur in China? Species delimitation and identification with DNA barcoding and morphometric analyses.
准噶尔沙蜥(奥尔洛娃、波亚尔科夫、奇里科娃、纳扎罗夫、蒙赫巴托尔、蒙赫巴亚尔和特尔比什,2017年)在中国有分布吗?基于DNA条形码和形态计量分析的物种界定与鉴定。
Zool Res. 2021 May 18;42(3):287-293. doi: 10.24272/j.issn.2095-8137.2020.318.
4
Machine learning approaches outperform distance- and tree-based methods for DNA barcoding of Pterocarpus wood.机器学习方法在基于 DNA 条形码的紫檀木鉴定中优于距离和基于树的方法。
Planta. 2019 May;249(5):1617-1625. doi: 10.1007/s00425-019-03116-3. Epub 2019 Mar 1.
5
Formal nomenclature and description of cryptic species of the Encyrtus sasakii complex (Hymenoptera: Encyrtidae).隐种 Encyrtus sasakii 复合体(膜翅目:小蜂科)的正式命名和描述。
Sci Rep. 2016 Oct 4;6:34372. doi: 10.1038/srep34372.
6
Evaluating the Utility of Single-Locus DNA Barcoding for the Identification of Ribbon Worms (Phylum Nemertea).评估单基因座DNA条形码在识别纽形动物(纽形动物门)中的效用。
PLoS One. 2016 May 12;11(5):e0155541. doi: 10.1371/journal.pone.0155541. eCollection 2016.
7
Combining and Comparing Coalescent, Distance and Character-Based Approaches for Barcoding Microalgaes: A Test with Chlorella-Like Species (Chlorophyta).结合与比较用于微藻条形码分析的溯祖法、距离法和基于特征的方法:以类小球藻物种(绿藻门)为例的测试
PLoS One. 2016 Apr 19;11(4):e0153833. doi: 10.1371/journal.pone.0153833. eCollection 2016.
8
Pay Attention to the Overlooked Cryptic Diversity in Existing Barcoding Data: the Case of Mollusca with Character-Based DNA Barcoding.关注现有条形码数据中被忽视的隐秘多样性:以基于特征的DNA条形码技术研究软体动物为例
Mar Biotechnol (NY). 2016 Jun;18(3):327-35. doi: 10.1007/s10126-016-9692-x. Epub 2016 Feb 22.
9
DNA barcodes for the fishes of the Narmada, one of India's longest rivers.印度最长河流之一讷尔默达河鱼类的DNA条形码
PLoS One. 2014 Jul 3;9(7):e101460. doi: 10.1371/journal.pone.0101460. eCollection 2014.
10
Molecular phylogeny of Orthetrum dragonflies reveals cryptic species of Orthetrum pruinosum.丽翅蜻的分子系统发育揭示了霜背丽翅蜻的隐存物种。
Sci Rep. 2014 Jul 3;4:5553. doi: 10.1038/srep05553.