Department of Computer Science, The University of Tokyo Hongo 7-3-1, Bunkyo-ku, Tokyo, 113-0033 Japan.
Bioinformatics. 2010 Oct 1;26(19):2486-7. doi: 10.1093/bioinformatics/btq464. Epub 2010 Aug 12.
Text mining from the biomedical literature is of increasing importance, yet it is not easy for the bioinformatics community to create and run text mining workflows due to the lack of accessibility and interoperability of the text mining resources. The U-Compare system provides a wide range of bio text mining resources in a highly interoperable workflow environment where workflows can very easily be created, executed, evaluated and visualized without coding. We have linked U-Compare to Taverna, a generic workflow system, to expose text mining functionality to the bioinformatics community.
从生物医学文献中进行文本挖掘变得越来越重要,但由于生物信息学社区难以访问和互操作文本挖掘资源,因此他们很难创建和运行文本挖掘工作流程。U-Compare 系统在一个高度可互操作的工作流程环境中提供了广泛的生物文本挖掘资源,在这个环境中,无需编写代码就可以非常轻松地创建、执行、评估和可视化工作流程。我们已经将 U-Compare 链接到 Taverna(一种通用的工作流程系统),以便向生物信息学社区公开文本挖掘功能。