Department of Computer Science, University of Tokyo Hongo 7-3-1, Tokyo 113-0033, Japan.
Bioinformatics. 2009 Aug 1;25(15):1997-8. doi: 10.1093/bioinformatics/btp289. Epub 2009 May 4.
Due to the increasing number of text mining resources (tools and corpora) available to biologists, interoperability issues between these resources are becoming significant obstacles to using them effectively. UIMA, the Unstructured Information Management Architecture, is an open framework designed to aid in the construction of more interoperable tools. U-Compare is built on top of the UIMA framework, and provides both a concrete framework for out-of-the-box text mining and a sophisticated evaluation platform allowing users to run specific tools on any target text, generating both detailed statistics and instance-based visualizations of outputs. U-Compare is a joint project, providing the world's largest, and still growing, collection of UIMA-compatible resources. These resources, originally developed by different groups for a variety of domains, include many famous tools and corpora. U-Compare can be launched straight from the web, without needing to be manually installed. All U-Compare components are provided ready-to-use and can be combined easily via a drag-and-drop interface without any programming. External UIMA components can also simply be mixed with U-Compare components, without distinguishing between locally and remotely deployed resources.
由于生物学家可利用的文本挖掘资源(工具和语料库)越来越多,这些资源之间的互操作性问题成为有效使用它们的重大障碍。UIMA(非结构化信息管理体系结构)是一个开放框架,旨在帮助构建更具互操作性的工具。U-Compare 构建在 UIMA 框架之上,不仅提供了开箱即用的文本挖掘具体框架,还提供了一个复杂的评估平台,允许用户在任何目标文本上运行特定工具,生成输出的详细统计信息和基于实例的可视化。U-Compare 是一个联合项目,提供了全球最大且仍在不断增长的 UIMA 兼容资源集合。这些资源最初由不同的团队在各种领域开发,包括许多著名的工具和语料库。U-Compare 可以直接从网络上启动,无需手动安装。所有 U-Compare 组件都已准备好使用,可以通过拖放界面轻松组合,无需任何编程。外部 UIMA 组件也可以与 U-Compare 组件简单混合,无需区分本地和远程部署的资源。