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鸡 14 号染色体上对血蓝蛋白初级抗体反应的数量性状位点——确认和候选基因方法。

A quantitative trait locus for a primary antibody response to keyhole limpet hemocyanin on chicken chromosome 14--confirmation and candidate gene approach.

机构信息

Department of Animal Biotechnology, University of Technology and Life Sciences, Mazowiecka 28, 85-225 Bydgoszcz, Poland.

出版信息

Poult Sci. 2010 Sep;89(9):1850-7. doi: 10.3382/ps.2010-00755.

Abstract

A QTL involved in the primary antibody response toward keyhole limpet hemocyanin (KLH) was detected on chicken chromosome 14 in the experimental population, which was created by crossing commercial White Leghorn and a Polish native chicken breed (green-legged partridgelike). The current QTL location is a validation of previous experiments pointing to the same genomic location for the QTL linked to a primary antibody response to KLH. An experimental population was typed with microsatellite markers distributed over the chicken chromosome 14. Titers of antibodies binding KLH were measured for all individuals by ELISA. Statistical models applied in the Grid QTL Web-based software were used to analyze the data: a half-sib model, a line-cross model, and combined analysis in a linkage disequilibrium and linkage analysis model. Candidate genes that have been proposed were genotyped with SNP located in genes exons. Statistical analyses of single SNP associations were performed pointing out 2 SNP of an axis inhibitor protein (AXIN1) gene as significantly associated with the trait of an interest.

摘要

在实验群体中,鸡 14 号染色体上发现了一个与血蓝蛋白(KLH)初级抗体反应有关的 QTL,该实验群体是通过杂交商业白来航鸡和波兰本土鸡种(绿腿鹧鸪样鸡)创建的。目前的 QTL 位置验证了先前的实验,表明与 KLH 初级抗体反应相关的 QTL 位于同一基因组位置。实验群体使用分布在鸡 14 号染色体上的微卫星标记进行分型。通过 ELISA 测量所有个体与 KLH 结合的抗体滴度。在 Grid QTL 基于网络的软件中应用的统计模型用于分析数据:半同胞模型、线交叉模型以及在连锁不平衡和连锁分析模型中进行的联合分析。提出了候选基因,并用位于基因外显子中的 SNP 进行了基因分型。对单 SNP 关联的统计分析指出,轴抑制剂蛋白(AXIN1)基因中的 2 个 SNP 与该性状显著相关。

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