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An extreme thermophile, Thermus thermophilus, is a polyploid bacterium.一种极端嗜热菌,嗜热栖热菌,是一种多倍体细菌。
J Bacteriol. 2010 Oct;192(20):5499-505. doi: 10.1128/JB.00662-10. Epub 2010 Aug 20.
2
The genome sequence of the extreme thermophile Thermus thermophilus.嗜热栖热菌的基因组序列。
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3
Mapping of 61 genes on the refined physical map of the chromosome of Thermus thermophilus HB27 and comparison of genome organization with that of T. thermophilus HB8.嗜热栖热菌HB27染色体精细物理图谱上61个基因的定位以及与嗜热栖热菌HB8基因组组织的比较。
Microbiology (Reading). 1996 Feb;142 ( Pt 2):401-410. doi: 10.1099/13500872-142-2-401.
4
Characterization of chromosomal and megaplasmid partitioning loci in Thermus thermophilus HB27.嗜热栖热菌HB27中染色体和大质粒分配位点的表征
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The third plasmid pVV8 from Thermus thermophilus HB8: isolation, characterization, and sequence determination.来自嗜热栖热菌 HB8 的第三个质粒 pVV8:分离、表征和序列测定。
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Comparative genomics of Thermus thermophilus and Deinococcus radiodurans: divergent routes of adaptation to thermophily and radiation resistance.嗜热栖热菌和耐辐射奇异球菌的比较基因组学:适应嗜热和抗辐射的不同途径
BMC Evol Biol. 2005 Oct 20;5:57. doi: 10.1186/1471-2148-5-57.
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The parABSm system is involved in megaplasmid partitioning and genome integrity maintenance in Thermus thermophilus.该 parABSm 系统参与了嗜热栖热菌中大型质粒的分配和基因组完整性的维持。
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Comparative genomics of Thermus thermophilus: Plasticity of the megaplasmid and its contribution to a thermophilic lifestyle.嗜热栖热菌的比较基因组学:巨型质粒的可塑性及其对嗜热生活方式的贡献。
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Engineering the genome of Thermus thermophilus using a counterselectable marker.利用可反向选择标记对嗜热栖热菌的基因组进行工程改造。
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Random Chromosome Partitioning in the Polyploid Bacterium HB27.多倍体细菌HB27中的随机染色体分配
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Crystal structure of 4-amino-5-hydroxymethyl-2-methyl pyrimidine phosphate kinase (HMPP kinase) from Thermus thermophilus HB8.嗜热栖热菌HB8来源的4-氨基-5-羟甲基-2-甲基嘧啶磷酸激酶(HMPP激酶)的晶体结构
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A type III-associated Cas6 functions as a negative regulator of type I-B CRISPR-Cas system in Thermus thermophilus.III型相关的Cas6在嗜热栖热菌中作为I-B型CRISPR-Cas系统的负调控因子发挥作用。
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One Advantage of Being Polyploid: Prokaryotes of Various Phylogenetic Groups Can Grow in the Absence of an Environmental Phosphate Source at the Expense of Their High Genome Copy Numbers.多倍体的一个优势:不同系统发育类群的原核生物能够在没有环境磷酸盐源的情况下生长,代价是它们具有高基因组拷贝数。
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7
The parABSm system is involved in megaplasmid partitioning and genome integrity maintenance in Thermus thermophilus.该 parABSm 系统参与了嗜热栖热菌中大型质粒的分配和基因组完整性的维持。
G3 (Bethesda). 2023 Apr 11;13(4). doi: 10.1093/g3journal/jkad038.
8
Deletion of the primase-polymerases encoding gene, located in a mobile element in HB27, leads to loss of function mutation of genes.位于HB27中一个可移动元件内的引发酶-聚合酶编码基因的缺失,导致基因功能丧失突变。
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Genomic attributes of thermophilic and hyperthermophilic bacteria and archaea.嗜热菌和超嗜热菌及古菌的基因组特征。
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Extreme Polyploidy of , an Organelle-Like Bacterium with a Drastically Reduced Genome.极度多倍体的, 一个具有剧烈缩小基因组的类器官细菌。
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本文引用的文献

1
The MG1363 and IL1403 laboratory strains of Lactococcus lactis and several dairy strains are diploid.乳球菌(Lactococcus lactis)的 MG1363 和 IL1403 实验室菌株以及一些乳制品菌株是二倍体。
J Bacteriol. 2010 Feb;192(4):1058-65. doi: 10.1128/JB.00900-09. Epub 2009 Dec 18.
2
Analysis of the recJ gene and protein from Deinococcus radiodurans.分析耐辐射球菌 recJ 基因和蛋白。
DNA Repair (Amst). 2010 Jan 2;9(1):66-75. doi: 10.1016/j.dnarep.2009.10.009. Epub 2009 Nov 26.
3
Recombination and replication in DNA repair of heavily irradiated Deinococcus radiodurans.耐辐射奇异球菌重度辐照后DNA修复中的重组与复制
Cell. 2009 Mar 20;136(6):1044-55. doi: 10.1016/j.cell.2009.01.018.
4
Characterization of DNA polymerase X from Thermus thermophilus HB8 reveals the POLXc and PHP domains are both required for 3'-5' exonuclease activity.嗜热栖热菌HB8中DNA聚合酶X的特性揭示,POLXc和PHP结构域对于3'-5'核酸外切酶活性都是必需的。
Nucleic Acids Res. 2009 Apr;37(6):2037-52. doi: 10.1093/nar/gkp064. Epub 2009 Feb 11.
5
Thermus thermophilus as biological model.嗜热栖热菌作为生物学模型。
Extremophiles. 2009 Mar;13(2):213-31. doi: 10.1007/s00792-009-0226-6. Epub 2009 Jan 21.
6
Blattabacteria, the endosymbionts of cockroaches, have small genome sizes and high genome copy numbers.蜚蠊杆菌作为蟑螂的内共生菌,基因组较小且基因组拷贝数较高。
Environ Microbiol. 2008 Dec;10(12):3417-22. doi: 10.1111/j.1462-2920.2008.01776.x.
7
Junction ribonuclease: a ribonuclease HII orthologue from Thermus thermophilus HB8 prefers the RNA-DNA junction to the RNA/DNA heteroduplex.连接核糖核酸酶:嗜热栖热菌HB8的核糖核酸酶HII直系同源物,相较于RNA/DNA异源双链体,更倾向于RNA-DNA连接。
Biochem J. 2008 Jun 15;412(3):517-26. doi: 10.1042/BJ20080140.
8
Bottom-up genome assembly using the Bacillus subtilis genome vector.使用枯草芽孢杆菌基因组载体进行自下而上的基因组组装。
Nat Methods. 2008 Jan;5(1):41-3. doi: 10.1038/nmeth1143. Epub 2007 Dec 9.
9
Fluorescence staining of live cyanobacterial cells suggest non-stringent chromosome segregation and absence of a connection between cytoplasmic and thylakoid membranes.活蓝藻细胞的荧光染色表明染色体分离不严格,且细胞质膜与类囊体膜之间不存在连接。
BMC Cell Biol. 2007 Sep 3;8:39. doi: 10.1186/1471-2121-8-39.
10
MreB is important for cell shape but not for chromosome segregation of the filamentous cyanobacterium Anabaena sp. PCC 7120.MreB对丝状蓝细菌鱼腥藻Anabaena sp. PCC 7120的细胞形态很重要,但对其染色体分离并不重要。
Mol Microbiol. 2007 Mar;63(6):1640-52. doi: 10.1111/j.1365-2958.2007.05618.x.

一种极端嗜热菌,嗜热栖热菌,是一种多倍体细菌。

An extreme thermophile, Thermus thermophilus, is a polyploid bacterium.

机构信息

Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata 997-0017, Japan.

出版信息

J Bacteriol. 2010 Oct;192(20):5499-505. doi: 10.1128/JB.00662-10. Epub 2010 Aug 20.

DOI:10.1128/JB.00662-10
PMID:20729360
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2950507/
Abstract

An extremely thermophilic bacterium, Thermus thermophilus HB8, is one of the model organisms for systems biology. Its genome consists of a chromosome (1.85 Mb), a megaplasmid (0.26 Mb) designated pTT27, and a plasmid (9.3 kb) designated pTT8, and the complete sequence is available. We show here that T. thermophilus is a polyploid organism, harboring multiple genomic copies in a cell. In the case of the HB8 strain, the copy number of the chromosome was estimated to be four or five, and the copy number of the pTT27 megaplasmid seemed to be equal to that of the chromosome. It has never been discussed whether T. thermophilus is haploid or polyploid. However, the finding that it is polyploid is not surprising, as Deinococcus radiodurans, an extremely radioresistant bacterium closely related to Thermus, is well known to be a polyploid organism. As is the case for D. radiodurans in the radiation environment, the polyploidy of T. thermophilus might allow for genomic DNA protection, maintenance, and repair at elevated growth temperatures. Polyploidy often complicates the recognition of an essential gene in T. thermophilus as a model organism for systems biology.

摘要

一种极端嗜热细菌,嗜热栖热菌 HB8,是系统生物学的模式生物之一。其基因组由一个染色体(1.85 Mb)、一个巨型质粒(0.26 Mb,命名为 pTT27)和一个质粒(9.3 kb,命名为 pTT8)组成,其完整序列已经公布。我们在这里表明,嗜热栖热菌是一个多倍体生物,在一个细胞中含有多个基因组拷贝。在 HB8 菌株的情况下,染色体的拷贝数估计为四到五个,而 pTT27 巨型质粒的拷贝数似乎与染色体相等。虽然还没有讨论过嗜热栖热菌是单倍体还是多倍体,但它是多倍体这一发现并不奇怪,因为与嗜热栖热菌密切相关的极端耐辐射菌 Deinococcus radiodurans 就是众所周知的多倍体生物。正如耐辐射菌在辐射环境中一样,嗜热栖热菌的多倍体可能允许在升高的生长温度下保护、维持和修复基因组 DNA。多倍体通常会使嗜热栖热菌作为系统生物学的模式生物中的必需基因的识别变得复杂。