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多细胞红藻Antithamnion spec.中核酮糖-1,5-二磷酸羧化酶/加氧酶操纵子的结构

Structure of the rubisco operon from the multicellular red alga Antithamnion spec.

作者信息

Kostrzewa M, Valentin K, Maid U, Radetzky R, Zetsche K

机构信息

Institut für Pflanzenphysiologie, Justus-Liebig-Universität, Giessen, Federal Republic of Germany.

出版信息

Curr Genet. 1990 Dec;18(5):465-9. doi: 10.1007/BF00309918.

DOI:10.1007/BF00309918
PMID:2078870
Abstract

In the multicellular red alga Antithamnion spec. both rubisco genes (rbcL and rbcS) are encoded on the plastid DNA (ptDNA). Both genes are separated by a short A/T-rich spacer of 100 bp and are cotranscribed into an mRNA of approximately 2.7 kb. These findings are in extensive agreement with those obtained from two unicellular red algae (Porphyridium aerugineum and Cyanidium caldarium). The large subunit (LSU) of rubisco shows an amino acid homology of 82-87% with the LSUs from the two unicellular red algae and only about 55% to LSUs from green algae, higher plants and two cyanobacteria. The small subunit (SSU) of rubisco is more similar to those from the unicellular red algae and two algae which are members of the Chromophyta (about 60% homology) than to cyanobacterial and higher plant proteins (27-36% homology). These data indicate that rhodoplasts originated independently from the chloroplast line. The plastids of chromophytes and rhodophytes appear to be closely related.

摘要

在多细胞红藻Antithamnion spec.中,两种核酮糖-1,5-二磷酸羧化酶基因(rbcL和rbcS)均由质体DNA(ptDNA)编码。这两个基因被一个100 bp的富含A/T的短间隔区隔开,并共同转录成一个约2.7 kb的mRNA。这些发现与从两种单细胞红藻(铜绿紫球藻和嗜热蓝隐藻)中获得的结果广泛一致。核酮糖-1,5-二磷酸羧化酶的大亚基(LSU)与两种单细胞红藻的大亚基氨基酸同源性为82 - 87%,与绿藻、高等植物和两种蓝细菌的大亚基同源性仅约为55%。核酮糖-1,5-二磷酸羧化酶的小亚基(SSU)与单细胞红藻和两种属于色藻门的藻类的小亚基更相似(约60%同源性),而与蓝细菌和高等植物的蛋白质同源性较低(27 - 36%同源性)。这些数据表明红藻质体独立于叶绿体谱系起源。色藻和红藻的质体似乎密切相关。

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Structure of the rubisco operon from the multicellular red alga Antithamnion spec.多细胞红藻Antithamnion spec.中核酮糖-1,5-二磷酸羧化酶/加氧酶操纵子的结构
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本文引用的文献

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Molecular cloning and sequence analysis of the cyanobacterial gene for the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase.藻蓝细菌核酮糖-1,5-二磷酸羧化酶/加氧酶大亚基基因的分子克隆和序列分析。
Proc Natl Acad Sci U S A. 1983 Jul;80(13):4050-4. doi: 10.1073/pnas.80.13.4050.
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Isolation and sequence of the gene for the large subunit of ribulose-1,5-bisphosphate carboxylase from the cyanobacterium Anabaena 7120.从蓝藻鱼腥藻 7120 中分离并测定核酮糖-1,5-二磷酸羧化酶大亚基的基因序列。
Proc Natl Acad Sci U S A. 1983 Apr;80(7):1835-9. doi: 10.1073/pnas.80.7.1835.
3
Inverted repeat of Olisthodiscus luteus chloroplast DNA contains genes for both subunits of ribulose-1,5-bisphosphate carboxylase and the 32,000-dalton Q(B) protein: Phylogenetic implications.
褐藻小海带叶绿体23S rRNA基因的二级结构与系统发育
Plant Mol Biol. 1993 Mar;21(5):779-87. doi: 10.1007/BF00027111.
4
SecA is plastid-encoded in a red alga: implications for the evolution of plastid genomes and the thylakoid protein import apparatus.SecA在一种红藻中由质体编码:对质体基因组和类囊体蛋白导入装置进化的启示。
Mol Gen Genet. 1993 Jan;236(2-3):245-50. doi: 10.1007/BF00277119.
5
Glutamate synthase is plastid-encoded in a red alga: implications for the evolution of glutamate synthases.谷氨酸合酶在一种红藻中由质体编码:对谷氨酸合酶进化的启示。
Plant Mol Biol. 1993 Oct;23(1):77-85. doi: 10.1007/BF00021421.
6
Organization of plastid-encoded ATPase genes and flanking regions including homologues of infB and tsf in the thermophilic red alga Galdieria sulphuraria.嗜热红藻硫加尔迪藻中质体编码的ATP酶基因及侧翼区域的组织,包括infB和tsf的同源物
Plant Mol Biol. 1993 Oct;23(1):67-76. doi: 10.1007/BF00021420.
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The gene for ribosomal protein L27 is located on the plastid rather than the nuclear genome of the chlorophyll c-containing alga Pleurochrysis carterae.核糖体蛋白L27的基因位于含有叶绿素c的藻类卡特氏侧金盏藻的质体而非核基因组上。
Plant Mol Biol. 1994 Jan;24(1):253-7. doi: 10.1007/BF00040594.
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A gene phylogeny of the red algae (Rhodophyta) based on plastid rbcL.基于质体rbcL基因的红藻(红藻门)系统发育树。
Proc Natl Acad Sci U S A. 1994 Jul 19;91(15):7281-5. doi: 10.1073/pnas.91.15.7281.
9
Characterization of the duplicate ribulose-1,5-bisphosphate carboxylase genes and cbb promoters of Alcaligenes eutrophus.真养产碱杆菌重复的1,5-二磷酸核酮糖羧化酶基因及cbb启动子的特性分析
J Bacteriol. 1995 Aug;177(15):4442-50. doi: 10.1128/jb.177.15.4442-4450.1995.
10
Structural similarities between psbA genes from red and brown algae.红藻和褐藻的光系统II反应中心蛋白基因(psbA基因)之间的结构相似性。
Curr Genet. 1991 Jul;20(1-2):177-80. doi: 10.1007/BF00312783.
黄杆菌属叶绿体 DNA 反向重复序列含有核酮糖-1,5-二磷酸羧化酶大亚基和小亚基以及 32000 道尔顿的 Q(B)蛋白基因:系统发育意义。
Proc Natl Acad Sci U S A. 1986 Nov;83(22):8599-603. doi: 10.1073/pnas.83.22.8599.
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Studies with Cyanidium caldarium, an anomalously pigmented chlorophyte.对嗜热蓝藻,一种色素异常的绿藻进行的研究。
Arch Mikrobiol. 1959;32(3):270-7. doi: 10.1007/BF00409348.
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The nucleotide sequence of the tobacco chloroplast gene for the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase.烟草叶绿体中核酮糖-1,5-二磷酸羧化酶/加氧酶大亚基基因的核苷酸序列。
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6
The chloroplasts of some algal groups may have evolved from endosymbiotic eukaryotic algae.一些藻类群体的叶绿体可能是从内共生真核藻类进化而来的。
Ann N Y Acad Sci. 1981;361:193-208. doi: 10.1111/j.1749-6632.1981.tb46519.x.
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Extension of a flexible computer program for handling DNA sequence data.用于处理DNA序列数据的灵活计算机程序的扩展
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):113-20. doi: 10.1093/nar/12.1part1.113.
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The gene for the small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase is located close to the gene for the large subunit in the cyanobacterium Anacystis nidulans 6301.在蓝细菌集胞藻6301中,1,5 - 二磷酸核酮糖羧化酶/加氧酶小亚基的基因位于大亚基基因附近。
Nucleic Acids Res. 1983 Oct 25;11(20):6957-64. doi: 10.1093/nar/11.20.6957.
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J Mol Biol. 1982 Dec 25;162(4):775-93. doi: 10.1016/0022-2836(82)90547-2.
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The structure of the gene for the large subunit of ribulose 1,5-bisphosphate carboxylase from spinach chloroplast DNA.菠菜叶绿体DNA中1,5-二磷酸核酮糖羧化酶大亚基的基因结构。
Nucleic Acids Res. 1981 Jul 24;9(14):3251-70. doi: 10.1093/nar/9.14.3251.