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核酮糖-1,5-二磷酸羧化酶/加氧酶基因表明了色藻门和红藻门质体之间密切的系统发育关系。

Rubisco genes indicate a close phylogenetic relation between the plastids of Chromophyta and Rhodophyta.

作者信息

Valentin K, Zetsche K

机构信息

Institut für Pflanzenphysiologie, Justus Liebig Universität, Giessen, FRG.

出版信息

Plant Mol Biol. 1990 Oct;15(4):575-84. doi: 10.1007/BF00017832.

DOI:10.1007/BF00017832
PMID:2102375
Abstract

The genes for both subunits of Rubisco (rbcL, rbcS) are located on the plastome of the brown alga Ectocarpus siliculosus (Chromophyta, Phaeophyceae). The organization of these genes in the form of an operon was similar to that found in rhodoplasts, cyanobacteria and the plastids of Cryptomonas phi. Sequence analysis of the complete operon revealed a high degree of homology and great structural similarities to corresponding genes from two red algae. In contrast, sequence homology to Rubisco genes from chloroplasts and cyanobacteria was much lower. This clearly indicated a close phylogenetic relationship between the plastids of Rhodophyta and Chromophyta which seem to have evolved independently from the chloroplasts (polyphyletic origin). Our data suggest that the plastids of Chromophyta and Cryptophyta have originated from endosymbiotic unicellular red algae. Surprisingly, red and brown algal Rubiscos show a significantly higher degree of homology to that from a hydrogen bacterium than to those from cyanobacteria.

摘要

核酮糖-1,5-二磷酸羧化酶/加氧酶(Rubisco)两个亚基的基因(rbcL、rbcS)位于褐藻硅藻(Chromophyta,Phaeophyceae)的质体基因组上。这些基因以操纵子的形式组织,与红藻质体、蓝细菌和隐藻phi的质体中发现的情况相似。对完整操纵子的序列分析表明,与两种红藻的相应基因具有高度同源性和很大的结构相似性。相比之下,与叶绿体和蓝细菌的Rubisco基因的序列同源性要低得多。这清楚地表明红藻门和褐藻门的质体之间存在密切的系统发育关系,它们似乎是从叶绿体独立进化而来的(多源起源)。我们的数据表明,褐藻门和隐藻门的质体起源于内共生单细胞红藻。令人惊讶的是,红藻和褐藻的Rubisco与氢细菌的Rubisco的同源程度明显高于与蓝细菌的同源程度。

相似文献

1
Rubisco genes indicate a close phylogenetic relation between the plastids of Chromophyta and Rhodophyta.核酮糖-1,5-二磷酸羧化酶/加氧酶基因表明了色藻门和红藻门质体之间密切的系统发育关系。
Plant Mol Biol. 1990 Oct;15(4):575-84. doi: 10.1007/BF00017832.
2
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Sequence analysis and phylogenetic reconstruction of the genes encoding the large and small subunits of ribulose-1,5-bisphosphate carboxylase/oxygenase from the chlorophyll b-containing prokaryote Prochlorothrix hollandica.对来自含叶绿素b的原核生物荷兰原绿球藻的1,5-二磷酸核酮糖羧化酶/加氧酶大亚基和小亚基编码基因的序列分析及系统发育重建。
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本文引用的文献

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Activity expressed from cloned Anacystis nidulans large and small subunit ribulose bisphosphate carboxylase genes.从克隆的鱼腥藻大、小亚基核酮糖二磷酸羧化酶基因表达的活性。
Plant Mol Biol. 1985 Jul;5(4):257-63. doi: 10.1007/BF00020643.
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Sequence of the plastid rDNA spacer region of the brown alga Pylaiella littoralis (L.) Kjellm. Evolutionary significance.绿藻门褐藻 Pylaiella littoralis(L.)Kjellm 的质体 rDNA 间隔区序列。进化意义。
Plant Mol Biol. 1988 Sep;10(5):465-9. doi: 10.1007/BF00014952.
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Synthesis of active Olisthodiscus luteus ribulose-1,5-bisphosphate carboxylase in Escherichia coli.
从绿藻卷曲鱼腥藻中克隆和鉴定核酮糖-1,5-二磷酸羧化酶/加氧酶小亚基(RbcS)cDNA。
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Microarray profiling of plastid gene expression in a unicellular red alga, Cyanidioschyzon merolae.单细胞红藻梅氏嗜热栖热菌质体基因表达的微阵列分析
Plant Mol Biol. 2005 Oct;59(3):375-85. doi: 10.1007/s11103-005-0182-1.
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The single, ancient origin of chromist plastids.色素体的单一古老起源。
Proc Natl Acad Sci U S A. 2002 Nov 26;99(24):15507-12. doi: 10.1073/pnas.242379899. Epub 2002 Nov 15.
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A High-Resolution Gene Map of the Chloroplast Genome of the Red Alga Porphyra purpurea.紫紫菜叶绿体基因组的高分辨率基因图谱
Plant Cell. 1993 Apr;5(4):465-475. doi: 10.1105/tpc.5.4.465.
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Viruses infecting marine brown algae.感染海洋褐藻的病毒。
Virus Genes. 1998;16(1):111-7. doi: 10.1023/a:1007962112756.
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A model for the evolution of the plastid sec apparatus inferred from secY gene phylogeny.基于secY基因系统发育推断的质体sec装置进化模型。
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Secondary structure and phylogeny of the chloroplast 23S rRNA gene from the brown alga Pylaiella littoralis.褐藻小海带叶绿体23S rRNA基因的二级结构与系统发育
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SecA is plastid-encoded in a red alga: implications for the evolution of plastid genomes and the thylakoid protein import apparatus.SecA在一种红藻中由质体编码:对质体基因组和类囊体蛋白导入装置进化的启示。
Mol Gen Genet. 1993 Jan;236(2-3):245-50. doi: 10.1007/BF00277119.
在大肠杆菌中合成活性的 Olisthodiscus luteus 核酮糖-1,5-二磷酸羧化酶。
Plant Mol Biol. 1988 Nov;11(6):821-31. doi: 10.1007/BF00019522.
4
Analysis of Chromophytic and Rhodophytic Ribulose-1,5-Bisphosphate Carboxylase Indicates Extensive Structural and Functional Similarities among Evolutionarily Diverse Algae.分析有色体和红色体的核酮糖-1,5-二磷酸羧化酶表明,在进化上不同的藻类之间存在广泛的结构和功能相似性。
Plant Physiol. 1989 Nov;91(3):939-46. doi: 10.1104/pp.91.3.939.
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Molecular cloning and sequence analysis of the cyanobacterial gene for the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase.藻蓝细菌核酮糖-1,5-二磷酸羧化酶/加氧酶大亚基基因的分子克隆和序列分析。
Proc Natl Acad Sci U S A. 1983 Jul;80(13):4050-4. doi: 10.1073/pnas.80.13.4050.
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Isolation and sequence of the gene for the large subunit of ribulose-1,5-bisphosphate carboxylase from the cyanobacterium Anabaena 7120.从蓝藻鱼腥藻 7120 中分离并测定核酮糖-1,5-二磷酸羧化酶大亚基的基因序列。
Proc Natl Acad Sci U S A. 1983 Apr;80(7):1835-9. doi: 10.1073/pnas.80.7.1835.
7
Inverted repeat of Olisthodiscus luteus chloroplast DNA contains genes for both subunits of ribulose-1,5-bisphosphate carboxylase and the 32,000-dalton Q(B) protein: Phylogenetic implications.黄杆菌属叶绿体 DNA 反向重复序列含有核酮糖-1,5-二磷酸羧化酶大亚基和小亚基以及 32000 道尔顿的 Q(B)蛋白基因:系统发育意义。
Proc Natl Acad Sci U S A. 1986 Nov;83(22):8599-603. doi: 10.1073/pnas.83.22.8599.
8
The chloroplasts of some algal groups may have evolved from endosymbiotic eukaryotic algae.一些藻类群体的叶绿体可能是从内共生真核藻类进化而来的。
Ann N Y Acad Sci. 1981;361:193-208. doi: 10.1111/j.1749-6632.1981.tb46519.x.
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Extension of a flexible computer program for handling DNA sequence data.用于处理DNA序列数据的灵活计算机程序的扩展
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):113-20. doi: 10.1093/nar/12.1part1.113.
10
The gene for the small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase is located close to the gene for the large subunit in the cyanobacterium Anacystis nidulans 6301.在蓝细菌集胞藻6301中,1,5 - 二磷酸核酮糖羧化酶/加氧酶小亚基的基因位于大亚基基因附近。
Nucleic Acids Res. 1983 Oct 25;11(20):6957-64. doi: 10.1093/nar/11.20.6957.