胸膜肺炎放线杆菌 2 型和 6 型的基因组草案序列。
Draft genome sequences of Actinobacillus pleuropneumoniae serotypes 2 and 6.
机构信息
Department of Genetics and Biotechnology, Faculty of Agricultural Sciences, Aarhus University, Blichers Allé 20, Postboks 50, DK-8830 Tjele, Denmark.
出版信息
J Bacteriol. 2010 Nov;192(21):5846-7. doi: 10.1128/JB.00867-10. Epub 2010 Aug 27.
Abstract
Actinobacillus pleuropneumoniae is a bacterial pathogen that causes highly contagious respiratory infection in pigs and has a serious impact on the production economy and animal welfare. As clear differences in virulence between serotypes have been observed, the genetic basis should be investigated at the genomic level. Here, we present the draft genome sequences of the A. pleuropneumoniae serotypes 2 (strain 4226) and 6 (strain Femo).
摘要
胸膜肺炎放线杆菌是一种细菌性病原体，可导致猪发生高度传染性呼吸道感染，对生产经济和动物福利造成严重影响。鉴于不同血清型之间存在明显的毒力差异，应在基因组水平上对其遗传基础进行研究。在此，我们呈现了胸膜肺炎放线杆菌血清型 2（菌株 4226）和 6（菌株 Femo）的基因组草图序列。
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2
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Vet Microbiol. 2008 Jun 22;129(3-4):350-9. doi: 10.1016/j.vetmic.2007.12.003. Epub 2008 Jan 22.
3
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PLoS One. 2008 Jan 16;3(1):e1450. doi: 10.1371/journal.pone.0001450.
4
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J Bacteriol. 2008 Feb;190(4):1495-6. doi: 10.1128/JB.01845-07. Epub 2007 Dec 7.
5
RNAmmer: consistent and rapid annotation of ribosomal RNA genes.
Nucleic Acids Res. 2007;35(9):3100-8. doi: 10.1093/nar/gkm160. Epub 2007 Apr 22.
6
Development of a DIVA subunit vaccine against Actinobacillus pleuropneumoniae infection.
Vaccine. 2006 Nov 30;24(49-50):7226-37. doi: 10.1016/j.vaccine.2006.06.047. Epub 2006 Jul 7.
7
Large-scale prokaryotic gene prediction and comparison to genome annotation.
Bioinformatics. 2005 Dec 15;21(24):4322-9. doi: 10.1093/bioinformatics/bti701. Epub 2005 Oct 25.
8
Surface polysaccharides and iron-uptake systems of Actinobacillus pleuropneumoniae.
Can J Vet Res. 2004 Apr;68(2):81-5.
9
EasyGene--a prokaryotic gene finder that ranks ORFs by statistical significance.
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10
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.
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