Department of Biochemistry, Groningen Biomolecular Sciences and Biotechnology Institute, Netherlands Proteomics Centre, and Zernike Institute for Advanced Materials, University of Groningen, Groningen, The Netherlands.
Biophys J. 2010 Sep 8;99(5):1447-54. doi: 10.1016/j.bpj.2010.05.042.
We investigated the effect of amino acid composition and hydrophobic length of alpha-helical transmembrane peptides and the role of electrostatic interactions on the lateral diffusion of the peptides in lipid membranes. Model peptides of varying length and composition, and either tryptophans or lysines as flanking residues, were synthesized. The peptides were labeled with the fluorescent label Alexa Fluor 488 and incorporated into phospholipid bilayers of different hydrophobic thickness and composition. Giant unilamellar vesicles were formed by electroformation, and the lateral diffusion of the transmembrane peptides (and lipids) was determined by fluorescence correlation spectroscopy. In addition, we performed coarse-grained molecular-dynamics simulations of single peptides of different hydrophobic lengths embedded in planar membranes of different thicknesses. Both the experimental and simulation results indicate that lateral diffusion is sensitive to membrane thickness between the peptides and surrounding lipids. We did not observe a difference in the lateral diffusion of the peptides with respect to the presence of tryptophans or lysines as flanking residues. The specific lipid headgroup composition of the membrane has a much less pronounced impact on the diffusion of the peptides than does the hydrophobic thickness.
我们研究了α-螺旋跨膜肽的氨基酸组成和疏水性长度以及静电相互作用对肽在脂质膜中侧向扩散的影响。合成了具有不同长度和组成的模型肽,并将色氨酸或赖氨酸作为侧翼残基。将肽用荧光标记 Alexa Fluor 488 标记,并掺入具有不同疏水性厚度和组成的磷脂双层中。通过电形成形成巨大的单室囊泡,并通过荧光相关光谱法测定跨膜肽(和脂质)的侧向扩散。此外,我们还对不同疏水性长度的单个肽在不同厚度的平面膜中的粗粒度分子动力学模拟。实验和模拟结果均表明,侧向扩散对肽与周围脂质之间的膜厚度敏感。我们没有观察到侧翼残基存在色氨酸或赖氨酸的肽的侧向扩散存在差异。与疏水性厚度相比,膜中特定的脂质头基组成对肽的扩散影响要小得多。