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可溶性淀粉样β寡聚体和环形原纤维的β桶模型。

Beta-barrel models of soluble amyloid beta oligomers and annular protofibrils.

机构信息

Laboratory of Cell Biology, CCR, NCI, National Institutes of Health, Bethesda, Maryland, USA.

出版信息

Proteins. 2010 Dec;78(16):3458-72. doi: 10.1002/prot.22832.

Abstract

Both soluble and membrane-bound prefibrillar assemblies of Abeta (Aβ) peptides have been associated with Alzheimer's disease (AD). The size and nature of these assemblies vary greatly and are affected by many factors. Here, we present models of soluble hexameric assemblies of Aβ42 and suggest how they can lead to larger assemblies and eventually to fibrils. The common element in most of these assemblies is a six-stranded β-barrel formed by the last third of Aβ42, which is composed of hydrophobic residues and glycines. The hydrophobic core β-barrels of the hexameric models are shielded from water by the N-terminus and central segments. These more hydrophilic segments were modeled to have either predominantly β or predominantly α secondary structure. Molecular dynamics simulations were performed to analyze stabilities of the models. The hexameric models were used as starting points from which larger soluble assemblies of 12 and 36 subunits were modeled. These models were developed to be consistent with numerous experimental results.

摘要

可溶性和膜结合的 Abeta(Aβ)肽原纤维前体组装物都与阿尔茨海默病(AD)有关。这些组装物的大小和性质差异很大,受多种因素影响。在这里,我们提出了可溶性 Aβ42 六聚体组装物的模型,并提出了它们如何导致更大的组装体,最终导致纤维的形成。这些组装物中的大多数共同元素是由 Aβ42 的最后三分之一组成的六链β-桶,由疏水性残基和甘氨酸组成。六聚体模型的疏水核心β-桶被 N 端和中心片段屏蔽在水中。这些更亲水的片段被建模为具有主要β或主要α二级结构。进行了分子动力学模拟来分析模型的稳定性。六聚体模型被用作起点,从这些起点构建了 12 个和 36 个亚基的更大可溶性组装体。这些模型的开发与许多实验结果一致。

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