• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

核小体定位对基因的调控。

Gene regulation by nucleosome positioning.

机构信息

The Rockefeller University, New York, NY, 10065, USA.

出版信息

Trends Genet. 2010 Nov;26(11):476-83. doi: 10.1016/j.tig.2010.08.003. Epub 2010 Sep 9.

DOI:10.1016/j.tig.2010.08.003
PMID:20832136
Abstract

To achieve high compaction, most genomic DNA in eukaryotes is incorporated into nucleosomes; however, regulatory factors and transcriptional machinery must gain access to chromatin to extract genetic information. This conflict is partially resolved by a particular arrangement of nucleosome locations on the genome. Across all eukaryotic species, promoters and other regulatory sequences are more nucleosome-depleted, whereas transcribed regions tend to be occupied with well-positioned, high-density nucleosomal arrays. This nucleosome positioning pattern, as well as its dynamic regulation, facilitates the access of transcription factors to their target sites and plays a crucial role in determining the transcription level, cell-to-cell variation and activation or repression dynamics.

摘要

为实现高压缩率,真核生物中的大多数基因组 DNA 都被整合到核小体中;然而,调控因子和转录机制必须能够进入染色质以提取遗传信息。这种冲突在一定程度上可以通过基因组上核小体位置的特定排列来解决。在所有真核生物物种中,启动子和其他调控序列的核小体含量较低,而转录区域往往被位置良好、高密度的核小体阵列占据。这种核小体定位模式及其动态调节有助于转录因子与其靶位点的结合,并在决定转录水平、细胞间变异性以及激活或抑制动力学方面发挥着关键作用。

相似文献

1
Gene regulation by nucleosome positioning.核小体定位对基因的调控。
Trends Genet. 2010 Nov;26(11):476-83. doi: 10.1016/j.tig.2010.08.003. Epub 2010 Sep 9.
2
Dynamic nucleosome organization at hox promoters during zebrafish embryogenesis.在斑马鱼胚胎发生过程中,同源盒基因启动子处的动态核小体组织。
PLoS One. 2013 May 9;8(5):e63175. doi: 10.1371/journal.pone.0063175. Print 2013.
3
Weakly positioned nucleosomes enhance the transcriptional competency of chromatin.弱定位核小体增强染色质的转录能力。
PLoS One. 2010 Sep 24;5(9):e12984. doi: 10.1371/journal.pone.0012984.
4
The nucleosome landscape of Plasmodium falciparum reveals chromatin architecture and dynamics of regulatory sequences.恶性疟原虫的核小体图谱揭示了染色质结构和调控序列的动态变化。
Nucleic Acids Res. 2016 Mar 18;44(5):2110-24. doi: 10.1093/nar/gkv1214. Epub 2015 Nov 17.
5
Genome-wide nucleosome positioning is orchestrated by genomic regions associated with DNase I hypersensitivity in rice.全基因组核小体定位由水稻中与DNase I超敏反应相关的基因组区域协调。
PLoS Genet. 2014 May 22;10(5):e1004378. doi: 10.1371/journal.pgen.1004378. eCollection 2014 May.
6
Active nucleosome positioning beyond intrinsic biophysics is revealed by in vitro reconstitution.体外重组揭示了超越固有生物物理学的活性核小体定位。
Biochem Soc Trans. 2012 Apr;40(2):377-82. doi: 10.1042/BST20110730.
7
Nucleosome positioning in yeasts: methods, maps, and mechanisms.酵母中的核小体定位:方法、图谱及机制
Chromosoma. 2015 Jun;124(2):131-51. doi: 10.1007/s00412-014-0501-x. Epub 2014 Dec 23.
8
Well-positioned nucleosomes punctuate polycistronic pol II transcription units and flank silent gene arrays in .定位良好的核小体在多顺反子RNA聚合酶II转录单元中形成间隔,并位于沉默基因阵列的两侧。
Epigenetics Chromatin. 2017 Mar 20;10:14. doi: 10.1186/s13072-017-0121-9. eCollection 2017.
9
Global nucleosome positioning regulates salicylic acid mediated transcription in Arabidopsis thaliana.全局核小体定位调控拟南芥中水杨酸介导的转录。
BMC Plant Biol. 2015 Jan 21;15:13. doi: 10.1186/s12870-014-0404-2.
10
Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome.酿酒酵母基因组中H2A.Z核小体的平移和旋转设置。
Nature. 2007 Mar 29;446(7135):572-6. doi: 10.1038/nature05632.

引用本文的文献

1
Native nucleosome-positioning elements as alternatives to the 601 sequence for nucleosome repositioning studies.天然核小体定位元件作为用于核小体重新定位研究的601序列的替代物。
Nucleic Acids Res. 2025 Sep 5;53(17). doi: 10.1093/nar/gkaf822.
2
High-throughput epigenetic profiling immunoassays for accelerated disease research and clinical development.用于加速疾病研究和临床开发的高通量表观遗传学分析免疫测定法。
J Biol Chem. 2025 Jun 7;301(7):110352. doi: 10.1016/j.jbc.2025.110352.
3
Regulation of DNA translocation of chromatin remodeler enzyme Chd1 by exit DNA unwrapping.
通过退出DNA解旋对染色质重塑酶Chd1的DNA易位进行调控。
Life Metab. 2025 Apr 9;4(3):loaf013. doi: 10.1093/lifemeta/loaf013. eCollection 2025 Jun.
4
Exomeres and supermeres: Current advances and perspectives.外膜粒和超膜粒:当前进展与展望
Bioact Mater. 2025 Apr 16;50:322-343. doi: 10.1016/j.bioactmat.2025.04.012. eCollection 2025 Aug.
5
The histone chaperone Spn1 preserves chromatin protections at promoters and nucleosome positioning in open reading frames.组蛋白伴侣Spn1维持启动子处的染色质保护及开放阅读框中的核小体定位。
G3 (Bethesda). 2025 Apr 17;15(4). doi: 10.1093/g3journal/jkaf032.
6
Native nucleosome-positioning elements for the investigation of nucleosome repositioning.用于研究核小体重新定位的天然核小体定位元件。
bioRxiv. 2025 Jan 18:2025.01.17.633597. doi: 10.1101/2025.01.17.633597.
7
Nanoscale Characterization of Interaction of Nucleosomes with H1 Linker Histone.核小体与H1连接组蛋白相互作用的纳米尺度表征
Int J Mol Sci. 2024 Dec 31;26(1):303. doi: 10.3390/ijms26010303.
8
ISWI1 complex proteins facilitate developmental genome editing in .ISWI1复合蛋白促进了……中的发育基因组编辑。 (原文中“in”后面缺少具体内容)
Genome Res. 2025 Jan 22;35(1):93-108. doi: 10.1101/gr.278402.123.
9
Creating a bacterium that forms eukaryotic nucleosome core particles.创建一种能够形成真核核小体核心颗粒的细菌。
Nat Commun. 2024 Sep 27;15(1):8283. doi: 10.1038/s41467-024-52484-2.
10
An integrated machine-learning model to predict nucleosome architecture.一种用于预测核小体结构的集成机器学习模型。
Nucleic Acids Res. 2024 Sep 23;52(17):10132-10143. doi: 10.1093/nar/gkae689.