Laboratory of Biotechnology, Delft University of Technology, Julianalaan 67, 2628 BC Delft, The Netherlands.
Biochemistry. 2010 Nov 16;49(45):9911-21. doi: 10.1021/bi100974v. Epub 2010 Oct 21.
Nitrate reductases (Nars) belong to the DMSO reductase family of molybdoenzymes. The hyperthermophilic denitrifying archaeon Pyrobaculum aerophilum exhibits nitrate reductase (Nar) activity even at WO(4)(2-) concentrations that are inhibitory to bacterial Nars. In this report, we establish that the enzyme purified from cells grown with 4.5 μM WO(4)(2-) contains W as the metal cofactor but is otherwise identical to the Mo-Nar previously purified from P. aerophilum grown at low WO(4)(2-) concentrations. W is coordinated by a bis-molybdopterin guanine dinucleotide cofactor. The W-Nar has a 2-fold lower turnover number (633 s(-1)) but the same K(m) value for nitrate (56 μM) as the Mo-Nar. Quinol reduction and nitrate oxidation experiments monitored by EPR with both pure W-Nar and mixed W- and Mo-Nar preparations suggest a monodentate ligation by the conserved Asp241 for W(V), while Asp241 acts as a bidentate ligand for Mo(V). Redox titrations of the Mo-Nar revealed a midpoint potential of 88 mV for Mo(V/IV). The E(m) for W(V/IV) of the purified W-Nar was estimated to be -8 mV. This relatively small difference in midpoint potential is consistent with comparable enzyme activities of W- and Mo-Nars. Unlike bacterial Nars, the P. aerophilum Nar contains a unique membrane anchor, NarM, with a single heme of the o(P) type (E(m) = 126 mV). In contrast to bacterial Nars, the P. aerophilum Nar faces the cell's exterior and, hence, does not contribute to the proton motive force. Formate is used as a physiological electron donor. This is the first description of an active W-containing Nar demonstrating the unique ability of hyperthermophiles to adapt to their high-WO(4)(2-) environment.
硝酸还原酶(Nars)属于 DMSO 还原酶家族的钼酶。嗜热反硝化古菌 Pyrobaculum aerophilum 即使在对细菌 Nars 具有抑制作用的 WO(4)(2-)浓度下,也表现出硝酸还原酶(Nar)活性。在本报告中,我们确定从用 4.5 μM WO(4)(2-)培养的细胞中纯化的酶含有 W 作为金属辅因子,但与以前从 WO(4)(2-)浓度较低的 P. aerophilum 中纯化的 Mo-Nar 完全相同。W 由双钼喋呤鸟嘌呤二核苷酸辅因子配位。W-Nar 的周转率低 2 倍(633 s(-1)),但对硝酸盐的 K(m)值相同(56 μM),如 Mo-Nar。通过纯 W-Nar 和混合 W-和 Mo-Nar 制剂的 EPR 监测的醌还原和硝酸盐氧化实验表明,对于 W(V),保守的 Asp241 具有单齿配位,而 Asp241 作为 Mo(V)的双齿配体。Mo-Nar 的氧化还原滴定显示 Mo(V/IV)的中点电位为 88 mV。纯化的 W-Nar 的 W(V/IV)的 E(m)估计为-8 mV。中点电位的这种相对较小差异与 W-和 Mo-Nars 的可比酶活性一致。与细菌 Nars 不同,P. aerophilum Nar 含有独特的膜锚 NarM,带有单个 o(P)型血红素(E(m) = 126 mV)。与细菌 Nars 不同,P. aerophilum Nar 面向细胞的外部,因此不会为质子动力提供动力。甲酸盐用作生理电子供体。这是第一个描述具有活性 W 的 Nar 的描述,证明了嗜热生物适应其高 WO(4)(2-)环境的独特能力。