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细胞运输的拔河模型动力学

Dynamics of the tug-of-war model for cellular transport.

作者信息

Zhang Yunxin, Fisher Michael E

机构信息

Institute for Physical Science and Technology, University of Maryland, College Park, Maryland 20742-8510, USA.

出版信息

Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Jul;82(1 Pt 1):011923. doi: 10.1103/PhysRevE.82.011923. Epub 2010 Jul 23.

DOI:10.1103/PhysRevE.82.011923
PMID:20866664
Abstract

The transport of organelles and other cargoes in living cells has been described by a kinetic tug-of-war model advanced by Müller, Klumpp, and Lipowsky, in which, as a function of time, t, a team of n+ (t)=0,1,⋯,N+ molecular motors may attach a cargo to a filamentous track and pull it towards the plus end in competition with n- (t)=0,1,⋯,N- motors that pull towards the opposite end. In recent work [Y. Zhang, Phys. Rev. E 79, 061918 (2009)] this model was analyzed for N+,N->>1, establishing the existence, depending on the motor parameters and the ratio ν=N+/N-, of system states with either one, two, or three distinct stable stationary modes of motion. Here, adopting a theoretical perspective, we study the parametric and ν dependence of the transitions between these mono-, bi-, or tristable system states and examine their associated trajectories and domains of attraction in the flow space, (n+,n-), of the attached motor numbers. Various sequences of winning, losing, and "stalemate" or close-to-motionless modes are uncovered. When, as realistic, N+ and N- are of order 2 to 10, fluctuations will move the system from one of two or three modes of motion to another mode. An analysis of the associated probability fluxes demonstrates that the mean time between mode-to-mode transitions increases exponentially with N+ and N-. The overall stall force, i.e., the externally imposed load under which the mean cargo velocity vanishes, is similarly elucidated and shown to vary strongly but sublinearly with N+ and N-, as well as depending in a less than transparent manner on other model parameters beyond the stall forces of the individual + and - motors.

摘要

活细胞中细胞器和其他货物的运输已由Müller、Klumpp和Lipowsky提出的动力学拔河模型描述。在该模型中,作为时间t的函数,n+(t)=0,1,⋯,N+个分子马达组成的团队可能会将货物附着到丝状轨道上,并与向相反方向拉动的n-(t)=0,1,⋯,N-个马达竞争,将其拉向正端。在最近的工作[Y. Zhang, Phys. Rev. E 79, 061918 (2009)]中,对N+、N->>1的情况分析了该模型,确定了取决于马达参数和比率ν=N+/N-的具有一、二或三种不同稳定静止运动模式的系统状态的存在。这里,从理论角度出发,我们研究这些单稳态、双稳态或三稳态系统状态之间转变的参数依赖性和ν依赖性,并检查它们在附着马达数量的流动空间(n+,n-)中的相关轨迹和吸引域。发现了各种获胜、失败以及“僵持”或接近静止模式的序列。当N+和N-如实际情况那样为2到10的量级时,涨落会使系统从两种或三种运动模式之一转变到另一种模式。对相关概率通量的分析表明,模式间转变的平均时间随N+和N-呈指数增加。整体失速力,即货物平均速度消失时的外部施加负载,也以类似方式得到阐明,并显示出随N+和N-强烈但亚线性变化,并且以一种不太透明的方式依赖于除单个正、负马达失速力之外的其他模型参数。

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