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细胞色素 P450 与配体的相互作用。

Interactions of cytochrome P450s with their ligands.

机构信息

Department of Medicinal Chemistry, University of Washington, Seattle, WA 98195-7610, USA.

出版信息

Arch Biochem Biophys. 2011 Mar 1;507(1):56-65. doi: 10.1016/j.abb.2010.10.006. Epub 2010 Oct 19.

Abstract

Cytochrome P450s (CYPs) are heme-containing monooxygenases that contribute to an enormous range of enzymatic function including biosynthetic and detoxification roles. This review summarizes recent studies concerning interactions of CYPs with ligands including substrates, inhibitors, and diatomic heme-ligating molecules. These studies highlight the complexity in the relationship between the heme spin state and active site occupancy, the roles of water in directing protein-ligand and ligand-heme interactions, and the details of interactions between heme and gaseous diatomic CYP ligands. Both kinetic and thermodynamic aspects of ligand binding are considered.

摘要

细胞色素 P450 酶(CYPs)是一类含有血红素的单加氧酶,参与了广泛的酶学功能,包括生物合成和解毒作用。本文综述了最近关于 CYPs 与配体相互作用的研究,包括底物、抑制剂和双原子血红素配体分子。这些研究强调了血红素自旋状态与活性位点占据之间关系的复杂性、水在指导蛋白-配体和配体-血红素相互作用中的作用,以及血红素与气态双原子 CYP 配体相互作用的细节。同时考虑了配体结合的动力学和热力学方面。

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本文引用的文献

1
The effects of type II binding on metabolic stability and binding affinity in cytochrome P450 CYP3A4.
Arch Biochem Biophys. 2010 May;497(1-2):68-81. doi: 10.1016/j.abb.2010.03.011. Epub 2010 Mar 25.
2
Two-dimensional NMR and all-atom molecular dynamics of cytochrome P450 CYP119 reveal hidden conformational substates.
J Biol Chem. 2010 Mar 26;285(13):9594-9603. doi: 10.1074/jbc.M109.087593. Epub 2010 Jan 22.
3
Molecular recognition and drug-lead identification: what can molecular simulations tell us?
Curr Med Chem. 2010;17(1):25-41. doi: 10.2174/092986710789957797.
4
Role of water in molecular docking simulations of cytochrome P450 2D6.
J Chem Inf Model. 2010 Jan;50(1):146-54. doi: 10.1021/ci900293e.
6
Isocyanides inhibit human heme oxygenases at the verdoheme stage.
Biochemistry. 2009 Sep 22;48(37):8920-8. doi: 10.1021/bi9011258.
7
Interaction of Mycobacterium tuberculosis CYP130 with heterocyclic arylamines.
J Biol Chem. 2009 Sep 11;284(37):25211-9. doi: 10.1074/jbc.M109.017632. Epub 2009 Jul 15.
8
Mixing apples and oranges: Analysis of heterotropic cooperativity in cytochrome P450 3A4.
Arch Biochem Biophys. 2009 Aug 15;488(2):146-52. doi: 10.1016/j.abb.2009.06.013. Epub 2009 Jun 26.
10
Reaction of Mycobacterium tuberculosis cytochrome P450 enzymes with nitric oxide.
Biochemistry. 2009 Feb 10;48(5):863-72. doi: 10.1021/bi801595t.

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