Department of Medicinal Chemistry, Box 357610, University of Washington, Seattle, WA 98195-7610, USA.
Biochemistry. 2012 Aug 14;51(32):6441-57. doi: 10.1021/bi300744z. Epub 2012 Jul 31.
In comparison to imidazole (IMZ) and 1,2,4-triazole (1,2,4-TRZ), the isosteric 1,2,3-triazole (1,2,3-TRZ) is unrepresented among cytochrome P450 (CYP) inhibitors. This is surprising because 1,2,3-TRZs are easily obtained via "click" chemistry. To understand this underrepresentation of 1,2,3-TRZs among CYP inhibitors, thermodynamic and density functional theory computational studies were performed with unsubstituted IMZ, 1,2,4-TRZ, and 1,2,3-TRZ. The results indicate that the lower affinity of 1,2,3-TRZ for the heme iron includes a large unfavorable entropy term likely originating in solvent-1,2,3-TRZ interactions; the difference is not solely due to differences in the enthalpy of heme-ligand interactions. In addition, the 1,2,3-TRZ fragment was incorporated into a well-established CYP3A4 substrate and mechanism-based inactivator, 17-α-ethynylestradiol (17EE), via click chemistry. This derivative, 17-click, yielded optical spectra consistent with low-spin ferric heme iron (type II) in contrast to 17EE, which yields a high-spin complex (type I). Furthermore, the rate of CYP3A4-mediated metabolism of 17-click was comparable to that of 17EE, with a different regioselectivity. Surprisingly, continuous-wave electron paramagnetic resonance (EPR) and HYSCORE EPR spectroscopy indicate that 17-click does not displace water from the sixth axial ligand position of CYP3A4 as expected for a type II ligand. We propose a binding model in which 17-click pendant 1,2,3-TRZ hydrogen bonds with the sixth axial water ligand. The results demonstrate the potential for 1,2,3-TRZ to form metabolically labile water-bridged low-spin heme complexes, consistent with recent evidence that nitrogenous type II ligands of CYPs can be efficiently metabolized. The specific case of [CYP3A4·17-click] highlights the risk of interpreting CYP-ligand complex structure on the basis of optical spectra.
与咪唑 (IMZ) 和 1,2,4-三唑 (1,2,4-TRZ) 相比,同系物 1,2,3-三唑 (1,2,3-TRZ) 在细胞色素 P450 (CYP) 抑制剂中未被代表。这令人惊讶,因为 1,2,3-TRZs 可以通过“点击”化学轻松获得。为了理解 1,2,3-TRZs 在 CYP 抑制剂中的代表性不足,对未取代的 IMZ、1,2,4-TRZ 和 1,2,3-TRZ 进行了热力学和密度泛函理论计算研究。结果表明,1,2,3-TRZ 与血红素铁的亲和力较低,包括一个可能源自溶剂-1,2,3-TRZ 相互作用的大不利熵项;这种差异不仅仅是由于血红素配体相互作用的焓差造成的。此外,1,2,3-TRZ 片段通过点击化学被整合到一种成熟的 CYP3A4 底物和基于机制的失活剂 17-α-乙炔雌二醇 (17EE) 中。与生成高自旋配合物 (I 型) 的 17EE 不同,该衍生物 17-click 产生的光学光谱与低自旋 ferric 血红素铁 (II 型) 一致。此外,17-click 的 CYP3A4 介导的代谢速度与 17EE 相当,但具有不同的区域选择性。令人惊讶的是,连续波电子顺磁共振 (EPR) 和 HYSCORE EPR 光谱表明,17-click 并没有像预期的 II 型配体那样从 CYP3A4 的第六轴向配体位置置换出水。我们提出了一种结合模型,其中 17-click 上的 1,2,3-TRZ 侧链与第六轴向水配体形成氢键。结果表明,1,2,3-TRZ 有可能形成代谢不稳定的水桥接低自旋血红素配合物,这与最近的证据一致,即 CYP 的含氮 II 型配体可以被有效地代谢。[CYP3A4·17-click] 的具体情况突出了根据光学光谱解释 CYP-配体配合物结构的风险。