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形状的可互换性。

The exchangeability of shape.

作者信息

Dujardin Jean-Pierre Al, Kaba Dramane, Henry Amy B

机构信息

Department of Medical Entomology, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand.

出版信息

BMC Res Notes. 2010 Oct 22;3:266. doi: 10.1186/1756-0500-3-266.

Abstract

BACKGROUND

Landmark based geometric morphometrics (GM) allows the quantitative comparison of organismal shapes. When applied to systematics, it is able to score shape changes which often are undetectable by traditional morphological studies and even by classical morphometric approaches. It has thus become a fast and low cost candidate to identify cryptic species. Due to inherent mathematical properties, shape variables derived from one set of coordinates cannot be compared with shape variables derived from another set. Raw coordinates which produce these shape variables could be used for data exchange, however they contain measurement error. The latter may represent a significant obstacle when the objective is to distinguish very similar species.

RESULTS

We show here that a single user derived dataset produces much less classification error than a multiple one. The question then becomes how to circumvent the lack of exchangeability of shape variables while preserving a single user dataset. A solution to this question could lead to the creation of a relatively fast and inexpensive systematic tool adapted for the recognition of cryptic species.

CONCLUSIONS

To preserve both exchangeability of shape and a single user derived dataset, our suggestion is to create a free access bank of reference images from which one can produce raw coordinates and use them for comparison with external specimens. Thus, we propose an alternative geometric descriptive system that separates 2-D data gathering and analyzes.

摘要

背景

基于地标点的几何形态测量学(GM)能够对生物体形状进行定量比较。应用于系统分类学时,它能够对形状变化进行评分,而这些变化往往是传统形态学研究甚至经典形态测量方法所无法检测到的。因此,它已成为识别隐存物种的一种快速且低成本的方法。由于其固有的数学特性,源自一组坐标的形状变量无法与源自另一组坐标的形状变量进行比较。产生这些形状变量的原始坐标可用于数据交换,然而它们包含测量误差。当目标是区分非常相似的物种时,后者可能是一个重大障碍。

结果

我们在此表明,单个用户生成的数据集产生的分类误差比多个数据集要小得多。那么问题就变成了如何在保留单个用户数据集的同时规避形状变量缺乏可交换性的问题。这个问题的解决方案可能会带来一种相对快速且廉价的系统分类工具,适用于识别隐存物种。

结论

为了同时保留形状的可交换性和单个用户生成的数据集,我们建议创建一个免费访问的参考图像库,从中可以生成原始坐标并将其用于与外部标本进行比较。因此,我们提出了一种替代的几何描述系统,将二维数据收集和分析分开。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/270f/2987866/1dc7692a57e4/1756-0500-3-266-1.jpg

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