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破解“遗传缺失之谜”:肥胖分子解析领域的重大进展——但仍有许多工作要做。

Chipping away the 'missing heritability': GIANT steps forward in the molecular elucidation of obesity - but still lots to go.

机构信息

Department of Child and Adolescent Psychiatry and Psychotherapy, University of Duisburg-Essen, Essen, Germany.

出版信息

Obes Facts. 2010 Oct;3(5):294-303. doi: 10.1159/000321537. Epub 2010 Oct 15.

DOI:10.1159/000321537
PMID:20975295
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6452141/
Abstract

Although heritability of human body weight is assumed to be high, only a small fraction of the variance can as yet be attributed to molecular genetic factors. Single monogenic forms of obesity have been identified. Functionally relevant coding mutations in the melanocortin-4 receptor gene occur in 1-6% of extremely obese children and adolescents and thus represent the most common major gene effect. Genome-wide association studies (GWAS) had previously identified 14 obesity loci with genome-wide significant (p < 5 x 10-8) associations. Many of the respective genes are expressed in the central nervous system. The GIANT (Genetic Investigation of ANtropometric Traits) Consortium has now performed a meta-analysis of GWAS data based on 123,865 individuals of European ancestry followed by confirmatory analyses for the 42 best independent loci in up to 125,931 independent individuals (Speliotes et al: Association analyses of 249,796 individuals reveal eighteen new loci associated with body mass index. Nature Genetics; epub October 2010 [1]). Apart from confirming the 14 known loci, 18 novel BMI-associated loci (p < 5 x 10-8) were identified. Several of the new loci point to genes involved in key hypothalamic pathways of energy balance. The identified variants mostly have small to very small effect sizes; only 1-2% of the BMI variance is explained. Currently, a consensus explanation for this 'missing heritability' in complex diseases has not yet emerged.

摘要

虽然人体体重的遗传性被认为很高,但目前只有一小部分可以归因于分子遗传因素。已经确定了一些单基因肥胖形式。在极度肥胖的儿童和青少年中,黑素细胞皮质素-4 受体基因中的功能相关编码突变发生在 1-6%,因此代表最常见的主要基因效应。全基因组关联研究(GWAS)先前已确定了 14 个具有全基因组显著(p < 5 x 10-8)关联的肥胖基因座。各自的基因中有许多在中枢神经系统中表达。GIANT(人类体型遗传研究)联盟现在对基于 123865 名欧洲血统个体的 GWAS 数据进行了荟萃分析,随后对多达 125931 名独立个体中的 42 个最佳独立基因座进行了确认性分析(Speliotes 等人:对 249796 名个体的关联分析揭示了与体重指数相关的 18 个新基因座。自然遗传学;2010 年 10 月在线 [1])。除了确认 14 个已知基因座外,还确定了 18 个新的 BMI 相关基因座(p < 5 x 10-8)。新基因座中的几个指向涉及能量平衡关键下丘脑途径的基因。已鉴定的变体大多具有小到非常小的效应大小;只有 1-2%的 BMI 差异可以解释。目前,对于复杂疾病中的这种“遗传缺失”,还没有达成共识的解释。

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本文引用的文献

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Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index.对 249796 人的关联分析揭示了 18 个与体重指数相关的新位点。
Nat Genet. 2010 Nov;42(11):937-48. doi: 10.1038/ng.686. Epub 2010 Oct 10.
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Excess of rare variants in genes identified by genome-wide association study of hypertriglyceridemia.全基因组关联研究鉴定的与高甘油三酯血症相关基因的稀有变异过多。
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Large copy-number variations are enriched in cases with moderate to extreme obesity.大片段拷贝数变异在中至极重度肥胖病例中富集。
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Associations between BMI and the FTO gene are age dependent: results from the GINI and LISA birth cohort studies up to age 6 years.BMI 与 FTO 基因的相关性随年龄变化:GINI 和 LISA 出生队列研究结果至 6 岁。
Obes Facts. 2010 Jun;3(3):173-80. doi: 10.1159/000314612. Epub 2010 May 28.
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Common SNPs explain a large proportion of the heritability for human height.常见的单核苷酸多态性解释了人类身高遗传的很大一部分。
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Two new Loci for body-weight regulation identified in a joint analysis of genome-wide association studies for early-onset extreme obesity in French and german study groups.两个新的体重调节基因座在法国和德国研究组的早发性极端肥胖全基因组关联研究的联合分析中被发现。
PLoS Genet. 2010 Apr 22;6(4):e1000916. doi: 10.1371/journal.pgen.1000916.