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测定全氟辛酸(PFOA)和全氟辛烷磺酸(PFOS)与人血清白蛋白的结合能和结合部位。

Determination of energies and sites of binding of PFOA and PFOS to human serum albumin.

机构信息

Department of Chimica, Materiali e Ingegneria Chimica G. Natta, Politecnico di Milano, via Mancinelli 7, 20131 Milano, Italy.

出版信息

J Phys Chem B. 2010 Nov 25;114(46):14860-74. doi: 10.1021/jp106584b. Epub 2010 Oct 28.

Abstract

Structure and energies of the binding sites of perfluorooctanoic acid (PFOA) and perfluorooctane sulfonate (PFOS) to human serum albumin (HSA) were determined through molecular modeling. The calculations consisted of a compound approach based on docking, followed by molecular dynamics simulations and by the estimation of the free binding energies adopting WHAM-umbrella sampling and semiempirical methodologies. The binding sites so determined are common either to known HSA fatty acids sites or to other HSA sites known to bind to pharmaceutical compounds such as warfarin, thyroxine, indole, and benzodiazepin. Among the PFOA binding sites, five have interaction energies in excess of -6 kcal/mol, which become nine for PFOS. The calculated binding free energy of PFOA to the Trp 214 binding site is the highest among the PFOA complexes, -8.0 kcal/mol, in good agreement with literature experimental data. The PFOS binding site with the highest energy, -8.8 kcal/mol, is located near the Trp 214 binding site, thus partially affecting its activity. The maximum number of ligands that can be bound to HSA is 9 for PFOA and 11 for PFOS. The calculated data were adopted to predict the level of complexation of HSA as a function of the concentration of PFOA and PFOS found in human blood for different levels of exposition. The analysis of the factors contributing to the complex binding energy permitted to outline a set of guidelines for the rational design of alternative fluorinated surfactants with a lower bioaccumulation potential.

摘要

通过分子建模确定了全氟辛酸(PFOA)和全氟辛烷磺酸(PFOS)与人血清白蛋白(HSA)结合位点的结构和能量。计算包括基于对接的化合物方法,随后是分子动力学模拟,并通过 WHAM-伞状采样和半经验方法估计自由结合能。如此确定的结合位点与已知的 HSA 脂肪酸结合位点或其他已知与华法林、甲状腺素、吲哚和苯并二氮䓬等药物化合物结合的 HSA 结合位点相同。在 PFOA 结合位点中,有五个具有超过-6 kcal/mol 的相互作用能,对于 PFOS 则有九个。计算得到的 PFOA 与色氨酸 214 结合位点的结合自由能是所有 PFOA 复合物中最高的,为-8.0 kcal/mol,与文献实验数据吻合较好。能量最高的 PFOS 结合位点为-8.8 kcal/mol,位于色氨酸 214 结合位点附近,因此部分影响其活性。HSA 可结合的最大配体数量为 PFOA 为 9,PFOS 为 11。采用计算数据预测了 HSA 与 PFOA 和 PFOS 络合的程度,作为人血中不同暴露水平下发现的 PFOA 和 PFOS 浓度的函数。对有助于复合物结合能的因素的分析,为设计具有较低生物蓄积潜力的替代含氟表面活性剂提供了一组指导原则。

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