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犬新孢子虫和刚地弓形虫核苷三磷酸水解酶的结晶及初步X射线结构分析

Crystallization and preliminary X-ray structural analysis of nucleoside triphosphate hydrolases from Neospora caninum and Toxoplasma gondii.

作者信息

Matoba Kazuaki, Shiba Tomoo, Takeuchi Tsutomu, Sibley L David, Seiki Makiko, Kikyo Fumi, Horiuchi Toshio, Asai Takashi, Harada Shigeharu

机构信息

Department of Applied Biology, Graduate School of Science and Technology, Kyoto Institute of Technology, Kyoto 606-8585, Japan.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Nov 1;66(Pt 11):1445-8. doi: 10.1107/S1744309110032136. Epub 2010 Oct 28.

DOI:10.1107/S1744309110032136
PMID:21045291
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3001644/
Abstract

The nucleoside triphosphate hydrolases that are produced by Neospora caninum (NcNTPase) and Toxoplasma gondii (TgNTPase-I) have a different physiological function from the ubiquitous ecto-ATPases. The recombinant enzymes were crystallized at 293 K using polyethylene glycol 3350 as a precipitant and X-ray diffraction data sets were collected for NcNTPase (to 2.8 Å resolution) and TgNTPase-I (to 3.1 Å resolution) at 100 K using synchrotron radiation. The crystals of NcNTPase and TgNTPase-I belonged to the orthorhombic space group I222 (unit-cell parameters a = 93.6, b = 140.8, c = 301.1 Å) and the monoclinic space group P2(1) (unit-cell parameters a = 87.1, b = 123.5, c = 120.2 Å, β = 96.6°), respectively, with two NcNTPase (V(M) = 3.7 Å(3) Da(-1)) and four TgNTPase-I (V(M) = 2.7 Å(3) Da(-1)) molecules per asymmetric unit. SAD phasing trials using a data set (λ = 0.97904 Å) collected from a crystal of selenomethionylated NcNTPase gave an initial electron-density map of sufficient quality to build a molecular model of NcNTPase.

摘要

犬新孢子虫(NcNTPase)和刚地弓形虫(TgNTPase-I)产生的核苷三磷酸水解酶具有与普遍存在的胞外ATP酶不同的生理功能。使用聚乙二醇3350作为沉淀剂,在293K下使重组酶结晶,并在100K下使用同步辐射收集NcNTPase(分辨率为2.8Å)和TgNTPase-I(分辨率为3.1Å)的X射线衍射数据集。NcNTPase和TgNTPase-I的晶体分别属于正交空间群I222(晶胞参数a = 93.6,b = 140.8,c = 301.1Å)和单斜空间群P2(1)(晶胞参数a = 87.1,b = 123.5,c = 120.2Å,β = 96.6°),每个不对称单位分别含有两个NcNTPase(V(M) = 3.7Å(3)Da(-1))和四个TgNTPase-I(V(M) = 2.7Å(3)Da(-1))分子。使用从硒代甲硫氨酸化的NcNTPase晶体收集的数据集(λ = 0.97904Å)进行的SAD相位试验给出了质量足以构建NcNTPase分子模型的初始电子密度图。

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本文引用的文献

1
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Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Neosporosis and hammondiosis in dogs.
J Small Anim Pract. 2007 Jun;48(6):308-12. doi: 10.1111/j.1748-5827.2006.00236.x.
3
Epidemiology and control of neosporosis and Neospora caninum.新孢子虫病及犬新孢子虫的流行病学与防控
Clin Microbiol Rev. 2007 Apr;20(2):323-67. doi: 10.1128/CMR.00031-06.
4
The Buccaneer software for automated model building. 1. Tracing protein chains.用于自动模型构建的海盗软件。1. 追踪蛋白质链。
Acta Crystallogr D Biol Crystallogr. 2006 Sep;62(Pt 9):1002-11. doi: 10.1107/S0907444906022116. Epub 2006 Aug 19.
5
Identification of small-molecule inhibitors of nucleoside triphosphate hydrolase in Toxoplasma gondii.刚地弓形虫核苷三磷酸水解酶小分子抑制剂的鉴定
Antimicrob Agents Chemother. 2002 Aug;46(8):2393-9. doi: 10.1128/AAC.46.8.2393-2399.2002.
6
Maximum-likelihood density modification.最大似然密度修正
Acta Crystallogr D Biol Crystallogr. 2000 Aug;56(Pt 8):965-72. doi: 10.1107/s0907444900005072.
7
Automated MAD and MIR structure solution.自动分子置换法和分子内旋转法结构解析
Acta Crystallogr D Biol Crystallogr. 1999 Apr;55(Pt 4):849-61. doi: 10.1107/s0907444999000839.
8
Neospora caninum: tachyzoites express a potent type-I nucleoside triphosphate hydrolase.犬新孢子虫:速殖子表达一种强效的I型核苷三磷酸水解酶。
Exp Parasitol. 1998 Nov;90(3):277-85. doi: 10.1006/expr.1998.4346.
9
Upstream elements required for expression of nucleoside triphosphate hydrolase genes of Toxoplasma gondii.
Mol Biochem Parasitol. 1998 May 1;92(2):229-39. doi: 10.1016/s0166-6851(97)00220-x.
10
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J Biol Chem. 1998 May 15;273(20):12352-9. doi: 10.1074/jbc.273.20.12352.