• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

鲍鱼碳酸钙质贝壳有机基质的蛋白质组学分析。

Proteomic analysis of the organic matrix of the abalone Haliotis asinina calcified shell.

机构信息

UMR 5561 CNRS, Biogéosciences, Université de Bourgogne, 21000 Dijon, France.

出版信息

Proteome Sci. 2010 Nov 4;8:54. doi: 10.1186/1477-5956-8-54.

DOI:10.1186/1477-5956-8-54
PMID:21050442
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2989941/
Abstract

BACKGROUND

The formation of the molluscan shell is regulated to a large extent by a matrix of extracellular macromolecules that are secreted by the shell forming tissue, the mantle. This so called "calcifying matrix" is a complex mixture of proteins and glycoproteins that is assembled and occluded within the mineral phase during the calcification process. While the importance of the calcifying matrix to shell formation has long been appreciated, most of its protein components remain uncharacterised.

RESULTS

Recent expressed sequence tag (EST) investigations of the mantle tissue from the tropical abalone (Haliotis asinina) provide an opportunity to further characterise the proteins in the shell by a proteomic approach. In this study, we have identified a total of 14 proteins from distinct calcified layers of the shell. Only two of these proteins have been previously characterised from abalone shells. Among the novel proteins are several glutamine- and methionine-rich motifs and hydrophobic glycine-, alanine- and acidic aspartate-rich domains. In addition, two of the new proteins contained Kunitz-like and WAP (whey acidic protein) protease inhibitor domains.

CONCLUSION

This is one of the first comprehensive proteomic study of a molluscan shell, and should provide a platform for further characterization of matrix protein functions and interactions.

摘要

背景

软体动物壳的形成在很大程度上受到由壳形成组织(套膜)分泌的细胞外大分子基质的调节。这种所谓的“钙化基质”是一种蛋白质和糖蛋白的复杂混合物,在钙化过程中组装并包含在矿物质相中。虽然钙化基质对壳形成的重要性早已被认识,但它的大多数蛋白质成分仍未被描述。

结果

最近对热带鲍鱼(Haliotis asinina)套膜组织的表达序列标签(EST)研究为通过蛋白质组学方法进一步研究壳中的蛋白质提供了机会。在这项研究中,我们从壳的不同钙化层中总共鉴定出 14 种蛋白质。其中只有两种蛋白质以前从鲍鱼壳中被描述过。在新发现的蛋白质中,有几个富含谷氨酰胺和蛋氨酸的基序和富含疏水性甘氨酸、丙氨酸和酸性天冬氨酸的结构域。此外,两种新蛋白质含有 Kunitz 样和 WAP(乳酸性蛋白)蛋白酶抑制剂结构域。

结论

这是对软体动物壳进行的首次全面蛋白质组学研究之一,应该为进一步研究基质蛋白的功能和相互作用提供一个平台。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/ec3d0177df38/1477-5956-8-54-7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/9648fdf23c9c/1477-5956-8-54-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/455059df34c9/1477-5956-8-54-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/b80d7f09d51e/1477-5956-8-54-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/f0024a7553e9/1477-5956-8-54-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/8af8e42bb382/1477-5956-8-54-5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/4cdafb056779/1477-5956-8-54-6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/ec3d0177df38/1477-5956-8-54-7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/9648fdf23c9c/1477-5956-8-54-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/455059df34c9/1477-5956-8-54-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/b80d7f09d51e/1477-5956-8-54-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/f0024a7553e9/1477-5956-8-54-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/8af8e42bb382/1477-5956-8-54-5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/4cdafb056779/1477-5956-8-54-6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa6/2989941/ec3d0177df38/1477-5956-8-54-7.jpg

相似文献

1
Proteomic analysis of the organic matrix of the abalone Haliotis asinina calcified shell.鲍鱼碳酸钙质贝壳有机基质的蛋白质组学分析。
Proteome Sci. 2010 Nov 4;8:54. doi: 10.1186/1477-5956-8-54.
2
Deep conservation of bivalve nacre proteins highlighted by shell matrix proteomics of the Unionoida Elliptio complanata and Villosa lienosa.通过椭圆背角无齿蚌和线纹绒毛蚌的贝壳基质蛋白质组学突出显示双壳贝类珍珠层蛋白的深度保守性。
J R Soc Interface. 2017 Jan;14(126). doi: 10.1098/rsif.2016.0846.
3
In-depth proteomic analyses of (greenlip abalone) nacre and prismatic organic shell matrix.对(绿唇鲍)珍珠层和棱柱形有机贝壳基质进行深入的蛋白质组学分析。
Proteome Sci. 2018 Jun 15;16:11. doi: 10.1186/s12953-018-0139-3. eCollection 2018.
4
Proteomic strategy for identifying mollusc shell proteins using mild chemical degradation and trypsin digestion of insoluble organic shell matrix: a pilot study on Haliotis tuberculata.采用温和的化学降解和不溶性有机壳基质中胰蛋白酶消化的蛋白质组学策略鉴定软体动物壳蛋白:以皱纹盘鲍为例的初步研究。
Mar Biotechnol (NY). 2012 Aug;14(4):446-58. doi: 10.1007/s10126-011-9425-0. Epub 2011 Dec 13.
5
Transcriptome and proteome analysis of Pinctada margaritifera calcifying mantle and shell: focus on biomineralization.马氏珠母贝(Pinctada margaritifera) 钙腺和贝壳的转录组和蛋白质组分析:聚焦于生物矿化。
BMC Genomics. 2010 Nov 1;11:613. doi: 10.1186/1471-2164-11-613.
6
Characterisation and expression of the biomineralising gene Lustrin A during shell formation of the European abalone Haliotis tuberculata.在欧洲鲍 Haliotis tuberculata 的贝壳形成过程中生物矿化基因 Lustrin A 的特征描述和表达。
Comp Biochem Physiol B Biochem Mol Biol. 2014 Mar;169:1-8. doi: 10.1016/j.cbpb.2013.11.010. Epub 2013 Dec 7.
7
Ultrastructure of the mantle of the gastropod Haliotis asinina and mechanisms of shell regionalization.腹足纲动物红鲍的套膜超微结构与壳分区形成机制。
Cells Tissues Organs. 2011;194(2-4):103-7. doi: 10.1159/000324213. Epub 2011 Apr 28.
8
Parallel evolution of nacre building gene sets in molluscs.软体动物中珍珠层构建基因集的平行进化。
Mol Biol Evol. 2010 Mar;27(3):591-608. doi: 10.1093/molbev/msp278. Epub 2009 Nov 13.
9
Cloning and characterization of a novel Lustrin A gene from Haliotis discus hannai.从杂色鲍中克隆和鉴定一种新型的珠母贝亮氨酸拉链转录因子基因。
Comp Biochem Physiol B Biochem Mol Biol. 2020 Feb;240:110385. doi: 10.1016/j.cbpb.2019.110385. Epub 2019 Nov 7.
10
Identification of two carbonic anhydrases in the mantle of the European Abalone Haliotis tuberculata (Gastropoda, Haliotidae): phylogenetic implications.鉴定欧洲鲍(腹足纲,鲍科)外套膜中的两种碳酸酐酶:系统发育意义。
J Exp Zool B Mol Dev Evol. 2012 Jul;318(5):353-67. doi: 10.1002/jez.b.22452.

引用本文的文献

1
A Novel Kunitz-Type Serine Protease Inhibitor (HcKuSPI) is Involved in Antibacterial Defense in Innate Immunity and Participates in Shell Formation of Hyriopsis cumingii.一种新型库尼茨型丝氨酸蛋白酶抑制剂(HcKuSPI)参与先天性免疫中的抗菌防御并参与三角帆蚌的贝壳形成。
Mar Biotechnol (NY). 2024 Feb;26(1):37-49. doi: 10.1007/s10126-023-10275-8. Epub 2023 Dec 20.
2
Cell type and gene regulatory network approaches in the evolution of spiralian biomineralisation.螺旋动物生物矿化进化中的细胞类型和基因调控网络方法。
Brief Funct Genomics. 2023 Nov 17;22(6):509-516. doi: 10.1093/bfgp/elad033.
3
Evolutionary conservation and divergence of the transcriptional regulation of bivalve shell secretion across life-history stages.

本文引用的文献

1
Proteomic analysis of sea urchin (Strongylocentrotus purpuratus) spicule matrix.海胆(Strongylocentrotus purpuratus)骨针基质的蛋白质组学分析。
Proteome Sci. 2010 Jun 17;8:33. doi: 10.1186/1477-5956-8-33.
2
Dentinogenesis and Dentin Sialophosphoprotein (DSPP).牙本质形成与牙本质涎磷蛋白(DSPP)。
J Oral Biosci. 2009 Sep 10;51(3):134. doi: 10.2330/joralbiosci.51.134.
3
Expression of genes responsible for biomineralization of Pinctada fucata during development.在发育过程中,负责珍珠贝生物矿化的基因的表达。
双壳贝类贝壳分泌在不同生活史阶段转录调控的进化保守性与差异性。
R Soc Open Sci. 2022 Dec 21;9(12):221022. doi: 10.1098/rsos.221022. eCollection 2022 Dec.
4
Molecular characterization of accripin11, a soluble shell protein with an acidic C-terminus, identified in the prismatic layer of the Mediterranean fan mussel Pinna nobilis (Bivalvia, Pteriomorphia).棘皮扇贝(Pinna nobilis)棱柱层中一种具有酸性 C 末端的可溶性贝壳蛋白 accripin11 的分子特征鉴定(双壳纲,翼形亚纲)。
FEBS Open Bio. 2023 Jan;13(1):10-25. doi: 10.1002/2211-5463.13497. Epub 2022 Dec 3.
5
Proteomic and Transcriptomic Analyses in the Slipper Snail Uncover Shell Matrix Genes Expressed During Adult and Larval Biomineralization.拖鞋螺的蛋白质组学和转录组学分析揭示了在成体和幼体生物矿化过程中表达的贝壳基质基因。
Integr Org Biol. 2022 Aug 10;4(1):obac023. doi: 10.1093/iob/obac023. eCollection 2022.
6
Comparative Single-Cell Transcriptomics Reveals Novel Genes Involved in Bivalve Embryonic Shell Formation and Questions Ontogenetic Homology of Molluscan Shell Types.比较单细胞转录组学揭示了参与双壳贝类胚胎贝壳形成的新基因,并对软体动物贝壳类型的个体发育同源性提出了疑问。
Front Cell Dev Biol. 2022 Jun 9;10:883755. doi: 10.3389/fcell.2022.883755. eCollection 2022.
7
Minerals in biology and medicine.生物学与医学中的矿物质
RSC Adv. 2021 Jan 6;11(4):1939-1951. doi: 10.1039/d0ra09992a.
8
The 'Shellome' of the Crocus Clam Emphasizes Essential Components of Mollusk Shell Biomineralization.番红花帘蛤的“贝壳组构”强调了软体动物贝壳生物矿化的基本组成部分。
Front Genet. 2021 Jun 8;12:674539. doi: 10.3389/fgene.2021.674539. eCollection 2021.
9
Evolution of the Avian Eggshell Biomineralization Protein Toolkit - New Insights From Multi-Omics.鸟类蛋壳生物矿化蛋白工具包的进化——多组学的新见解
Front Genet. 2021 May 11;12:672433. doi: 10.3389/fgene.2021.672433. eCollection 2021.
10
Genotyping-by-Sequencing of the regional Pacific abalone (Haliotis discus) genomes reveals population structures and patterns of gene flow.基于测序的太平洋鲍(Haliotis discus)区域基因组分型揭示了种群结构和基因流动模式。
PLoS One. 2021 Apr 7;16(4):e0247815. doi: 10.1371/journal.pone.0247815. eCollection 2021.
Comp Biochem Physiol B Biochem Mol Biol. 2010 Mar;155(3):241-8. doi: 10.1016/j.cbpb.2009.11.009. Epub 2009 Nov 25.
4
Parallel evolution of nacre building gene sets in molluscs.软体动物中珍珠层构建基因集的平行进化。
Mol Biol Evol. 2010 Mar;27(3):591-608. doi: 10.1093/molbev/msp278. Epub 2009 Nov 13.
5
An acidic matrix protein, Pif, is a key macromolecule for nacre formation.一种酸性基质蛋白——珍珠母蛋白(Pif),是珍珠层形成的关键大分子。
Science. 2009 Sep 11;325(5946):1388-90. doi: 10.1126/science.1173793. Epub 2009 Aug 13.
6
Evolution of nacre: biochemistry and proteomics of the shell organic matrix of the cephalopod Nautilus macromphalus.珍珠层的演化:大脐鹦鹉螺贝壳有机基质的生物化学与蛋白质组学
Chembiochem. 2009 Jun 15;10(9):1495-506. doi: 10.1002/cbic.200900009.
7
In-depth, high-accuracy proteomics of sea urchin tooth organic matrix.海胆牙齿有机基质的深度、高精度蛋白质组学
Proteome Sci. 2008 Dec 9;6:33. doi: 10.1186/1477-5956-6-33.
8
The sea urchin (Strongylocentrotus purpuratus) test and spine proteomes.海胆(紫球海胆)的壳和刺蛋白质组。
Proteome Sci. 2008 Aug 11;6:22. doi: 10.1186/1477-5956-6-22.
9
Molluscan shell proteins: primary structure, origin, and evolution.软体动物贝壳蛋白:一级结构、起源与进化
Curr Top Dev Biol. 2008;80:209-76. doi: 10.1016/S0070-2153(07)80006-8.
10
Dynamic expression of ancient and novel molluscan shell genes during ecological transitions.生态转变过程中古老和新型软体动物贝壳基因的动态表达
BMC Evol Biol. 2007 Sep 10;7:160. doi: 10.1186/1471-2148-7-160.