Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
Plant Cell. 2010 Nov;22(11):3509-42. doi: 10.1105/tpc.110.079764. Epub 2010 Nov 16.
C(4) grasses, such as maize (Zea mays), have high photosynthetic efficiency through combined biochemical and structural adaptations. C(4) photosynthesis is established along the developmental axis of the leaf blade, leading from an undifferentiated leaf base just above the ligule into highly specialized mesophyll cells (MCs) and bundle sheath cells (BSCs) at the tip. To resolve the kinetics of maize leaf development and C(4) differentiation and to obtain a systems-level understanding of maize leaf formation, the accumulation profiles of proteomes of the leaf and the isolated BSCs with their vascular bundle along the developmental gradient were determined using large-scale mass spectrometry. This was complemented by extensive qualitative and quantitative microscopy analysis of structural features (e.g., Kranz anatomy, plasmodesmata, cell wall, and organelles). More than 4300 proteins were identified and functionally annotated. Developmental protein accumulation profiles and hierarchical cluster analysis then determined the kinetics of organelle biogenesis, formation of cellular structures, metabolism, and coexpression patterns. Two main expression clusters were observed, each divided in subclusters, suggesting that a limited number of developmental regulatory networks organize concerted protein accumulation along the leaf gradient. The coexpression with BSC and MC markers provided strong candidates for further analysis of C(4) specialization, in particular transporters and biogenesis factors. Based on the integrated information, we describe five developmental transitions that provide a conceptual and practical template for further analysis. An online protein expression viewer is provided through the Plant Proteome Database.
C(4) 类植物,如玉米(Zea mays),通过结合生化和结构适应来提高光合作用效率。C(4) 光合作用沿着叶片的发育轴建立,从位于叶舌上方的未分化叶基部延伸到尖端的高度特化的叶肉细胞(MCs)和维管束鞘细胞(BSCs)。为了阐明玉米叶片发育和 C(4) 分化的动力学,并从系统水平理解玉米叶片的形成,使用大规模质谱法测定了叶片和分离的 BSCs 及其沿发育梯度的维管束的蛋白质组的积累曲线。这通过对结构特征(例如,Kranz 解剖结构、胞间连丝、细胞壁和细胞器)的广泛定性和定量显微镜分析得到了补充。鉴定出超过 4300 种蛋白质并进行了功能注释。发育蛋白积累曲线和层次聚类分析确定了细胞器生物发生、细胞结构形成、代谢和共表达模式的动力学。观察到两个主要的表达簇,每个簇又分为亚簇,这表明少数几个发育调控网络沿着叶片梯度协调蛋白的积累。与 BSC 和 MC 标记的共表达为进一步分析 C(4) 特化提供了强有力的候选者,特别是转运蛋白和生物发生因子。基于综合信息,我们描述了五个发育转变,为进一步分析提供了概念和实用模板。通过植物蛋白质组数据库提供了在线蛋白质表达查看器。