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在稳定选择、突变和漂变下多基因性状的统计力学。

The statistical mechanics of a polygenic character under stabilizing selection, mutation and drift.

机构信息

Institute of Science and Technology Austria (IST Austria), Am Campus 1, Klosterneuburg A-3400, Austria.

出版信息

J R Soc Interface. 2011 May 6;8(58):720-39. doi: 10.1098/rsif.2010.0438. Epub 2010 Nov 17.

Abstract

By exploiting an analogy between population genetics and statistical mechanics, we study the evolution of a polygenic trait under stabilizing selection, mutation and genetic drift. This requires us to track only four macroscopic variables, instead of the distribution of all the allele frequencies that influence the trait. These macroscopic variables are the expectations of: the trait mean and its square, the genetic variance, and of a measure of heterozygosity, and are derived from a generating function that is in turn derived by maximizing an entropy measure. These four macroscopics are enough to accurately describe the dynamics of the trait mean and of its genetic variance (and in principle of any other quantity). Unlike previous approaches that were based on an infinite series of moments or cumulants, which had to be truncated arbitrarily, our calculations provide a well-defined approximation procedure. We apply the framework to abrupt and gradual changes in the optimum, as well as to changes in the strength of stabilizing selection. Our approximations are surprisingly accurate, even for systems with as few as five loci. We find that when the effects of drift are included, the expected genetic variance is hardly altered by directional selection, even though it fluctuates in any particular instance. We also find hysteresis, showing that even after averaging over the microscopic variables, the macroscopic trajectories retain a memory of the underlying genetic states.

摘要

利用群体遗传学和统计力学之间的类比,我们研究了在稳定选择、突变和遗传漂变下多基因性状的进化。这需要我们只追踪四个宏观变量,而不是影响性状的所有等位基因频率的分布。这四个宏观变量是性状均值及其平方、遗传方差以及杂合度的度量的期望,并从生成函数中得出,该生成函数又是通过最大化熵测度而得出的。这四个宏观变量足以准确描述性状均值及其遗传方差(原则上也可以描述任何其他数量)的动态。与之前基于无限级数的矩或累积量的方法不同,我们的计算提供了一种明确定义的逼近方法,这些方法必须任意截断。我们将该框架应用于最优值的突然和逐渐变化,以及稳定选择强度的变化。即使对于只有五个基因座的系统,我们的近似也非常准确。我们发现,当包括漂变的影响时,预期的遗传方差几乎不受定向选择的影响,尽管它在任何特定情况下都会波动。我们还发现滞后现象,表明即使在对微观变量进行平均之后,宏观轨迹仍保留了对潜在遗传状态的记忆。

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