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牛支原体实时聚合酶链反应检测方法的验证及诊断性能

Mycoplasma bovis real-time polymerase chain reaction assay validation and diagnostic performance.

作者信息

Clothier Kristin A, Jordan Dianna M, Thompson Curtis J, Kinyon Joann M, Frana Timothy S, Strait Erin L

机构信息

Iowa State University, Veterinary Department of Production Animal Medicine, 1600 S. 16th Street, Ames, IA 50011, USA.

出版信息

J Vet Diagn Invest. 2010 Nov;22(6):956-60. doi: 10.1177/104063871002200618.

DOI:10.1177/104063871002200618
PMID:21088183
Abstract

Mycoplasma bovis is an important bacterial pathogen in cattle, producing a variety of clinical diseases. The organism, which requires specialized culture conditions and extended incubation times to isolate and identify, is frequently associated with concurrent infection with other pathogens which can potentially be more easily identified. Real-time polymerase chain reaction (real-time PCR) is a valuable diagnostic technique that can rapidly identify infectious agents in clinical specimens. A real-time PCR assay was designed based on the uvrC gene to identify M. bovis in diagnostic samples. Using culture as the gold standard test, the assay performed well in a variety of diagnostic matrices. Initial validation testing was conducted on 122 milk samples (sensitivity: 88.9% [95% confidence interval (CI): 68.4-100%], specificity: 100%); 154 lung tissues (sensitivity: 89.0% [95% CI: 83.1-94.9%], specificity: 97.8% [95% CI: 93.5-100%]); 70 joint tissue/fluid specimens (sensitivity: 92.3% [95% CI: 82.1-100%], specificity: 95.5% [95% CI: 89.3-100%]); and 26 nasal swabs (sensitivity: 75.0% [95% CI: 45.0-100%], specificity: 83.3% [95% CI: 66.1-100%]). Low numbers of other sample matrices showed good agreement between results of culture and PCR. A review of clinical cases from 2009 revealed that, in general, PCR was used much more frequently than culture and provided useful diagnostic information in conjunction with clinical signs, signalment, and gross and histopathologic lesions. Diagnostic performance of the real-time PCR assay developed as a testing method indicates that it is a rapid, accurate assay that is adaptable to a variety of PCR platforms and can provide reliable results on an array of clinical samples.

摘要

牛支原体是牛群中一种重要的细菌病原体,可引发多种临床疾病。该病原体需要特殊的培养条件和较长的培养时间才能分离和鉴定,并且常与其他病原体合并感染,而其他病原体可能更容易识别。实时聚合酶链反应(实时PCR)是一种有价值的诊断技术,能够快速鉴定临床样本中的感染因子。基于uvrC基因设计了一种实时PCR检测方法,用于在诊断样本中鉴定牛支原体。以培养作为金标准检测方法,该检测方法在多种诊断样本类型中表现良好。最初在122份牛奶样本(敏感性:88.9% [95%置信区间(CI):68.4 - 100%],特异性:100%)、154份肺组织样本(敏感性:89.0% [95% CI:83.1 - 94.9%],特异性:97.8% [95% CI:93.5 - 100%])、70份关节组织/液样本(敏感性:92.3% [95% CI:82.1 - 100%],特异性:95.5% [95% CI:89.3 - 100%])以及26份鼻拭子样本(敏感性:75.0% [95% CI:45.0 - 100%],特异性:83.3% [95% CI:66.1 - 100%])上进行了验证测试。少量其他样本类型的培养结果和PCR结果之间也显示出良好的一致性。对2009年临床病例的回顾显示,总体而言,PCR的使用频率远高于培养,并且结合临床症状、病例信息以及大体和组织病理学病变可提供有用的诊断信息。作为一种检测方法,所开发的实时PCR检测方法的诊断性能表明,它是一种快速、准确的检测方法,适用于多种PCR平台,并且能够在一系列临床样本上提供可靠的结果。

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