• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

用于组织病理学图像分割的图游程长度矩阵。

Graph run-length matrices for histopathological image segmentation.

机构信息

Department of Computer Engineering, Bilkent University, Ankara TR-06800, Turkey.

出版信息

IEEE Trans Med Imaging. 2011 Mar;30(3):721-32. doi: 10.1109/TMI.2010.2094200. Epub 2010 Nov 22.

DOI:10.1109/TMI.2010.2094200
PMID:21097378
Abstract

The histopathological examination of tissue specimens is essential for cancer diagnosis and grading. However, this examination is subject to a considerable amount of observer variability as it mainly relies on visual interpretation of pathologists. To alleviate this problem, it is very important to develop computational quantitative tools, for which image segmentation constitutes the core step. In this paper, we introduce an effective and robust algorithm for the segmentation of histopathological tissue images. This algorithm incorporates the background knowledge of the tissue organization into segmentation. For this purpose, it quantifies spatial relations of cytological tissue components by constructing a graph and uses this graph to define new texture features for image segmentation. This new texture definition makes use of the idea of gray-level run-length matrices. However, it considers the runs of cytological components on a graph to form a matrix, instead of considering the runs of pixel intensities. Working with colon tissue images, our experiments demonstrate that the texture features extracted from "graph run-length matrices" lead to high segmentation accuracies, also providing a reasonable number of segmented regions. Compared with four other segmentation algorithms, the results show that the proposed algorithm is more effective in histopathological image segmentation.

摘要

组织标本的组织病理学检查对于癌症的诊断和分级至关重要。然而,由于该检查主要依赖病理学家的视觉解释,因此存在很大的观察者变异性。为了解决这个问题,开发计算定量工具非常重要,而图像分割则是核心步骤。在本文中,我们引入了一种用于组织病理学图像分割的有效且鲁棒的算法。该算法将组织的背景知识纳入到分割中。为此,它通过构建图来量化细胞学组织成分的空间关系,并使用该图为图像分割定义新的纹理特征。这种新的纹理定义利用了灰度游程矩阵的思想。但是,它考虑的是细胞学成分在图上的游程来形成矩阵,而不是考虑像素强度的游程。通过对结肠组织图像进行实验,我们的实验表明,从“图游程矩阵”中提取的纹理特征可实现较高的分割精度,同时还可提供数量合理的分割区域。与其他四种分割算法相比,结果表明,所提出的算法在组织病理学图像分割中更有效。

相似文献

1
Graph run-length matrices for histopathological image segmentation.用于组织病理学图像分割的图游程长度矩阵。
IEEE Trans Med Imaging. 2011 Mar;30(3):721-32. doi: 10.1109/TMI.2010.2094200. Epub 2010 Nov 22.
2
Automatic segmentation of colon glands using object-graphs.基于目标图的结肠腺自动分割。
Med Image Anal. 2010 Feb;14(1):1-12. doi: 10.1016/j.media.2009.09.001. Epub 2009 Sep 19.
3
Multilevel segmentation of histopathological images using cooccurrence of tissue objects.基于组织对象共现的组织病理图像多层次分割。
IEEE Trans Biomed Eng. 2012 Jun;59(6):1681-90. doi: 10.1109/TBME.2012.2191784. Epub 2012 Mar 23.
4
Toward objective evaluation of image segmentation algorithms.迈向图像分割算法的客观评估
IEEE Trans Pattern Anal Mach Intell. 2007 Jun;29(6):929-44. doi: 10.1109/TPAMI.2007.1046.
5
Graph partitioning active contours (GPAC) for image segmentation.用于图像分割的图划分活动轮廓模型(GPAC)
IEEE Trans Pattern Anal Mach Intell. 2006 Apr;28(4):509-21. doi: 10.1109/TPAMI.2006.76.
6
Isoperimetric graph partitioning for image segmentation.用于图像分割的等周图划分
IEEE Trans Pattern Anal Mach Intell. 2006 Mar;28(3):469-75. doi: 10.1109/TPAMI.2006.57.
7
Generalized flooding and Multicue PDE-based image segmentation.广义洪水填充与基于多线索偏微分方程的图像分割
IEEE Trans Image Process. 2008 Mar;17(3):364-76. doi: 10.1109/TIP.2007.916156.
8
Random walks for image segmentation.用于图像分割的随机游走算法
IEEE Trans Pattern Anal Mach Intell. 2006 Nov;28(11):1768-83. doi: 10.1109/TPAMI.2006.233.
9
Context-based segmentation of image sequences.基于上下文的图像序列分割
IEEE Trans Pattern Anal Mach Intell. 2006 Mar;28(3):463-8. doi: 10.1109/TPAMI.2006.47.
10
A scale-based connected coherence tree algorithm for image segmentation.一种用于图像分割的基于尺度的连通相干树算法。
IEEE Trans Image Process. 2008 Feb;17(2):204-16. doi: 10.1109/TIP.2007.912918.

引用本文的文献

1
Association of graph-based spatial features with overall survival status of glioblastoma patients.基于图的空间特征与胶质母细胞瘤患者总体生存状况的关联。
Sci Rep. 2023 Oct 9;13(1):17046. doi: 10.1038/s41598-023-44353-7.
2
Multiplex Immunofluorescence and the Digital Image Analysis Workflow for Evaluation of the Tumor Immune Environment in Translational Research.用于转化研究中肿瘤免疫环境评估的多重免疫荧光及数字图像分析工作流程
Front Oncol. 2022 Jun 27;12:889886. doi: 10.3389/fonc.2022.889886. eCollection 2022.
3
TA-Net: Topology-Aware Network for Gland Segmentation.
TA-Net:用于腺体分割的拓扑感知网络。
IEEE Winter Conf Appl Comput Vis. 2022 Jan;2022:3241-3249. doi: 10.1109/wacv51458.2022.00330. Epub 2022 Feb 15.
4
Radiomic and radiogenomic modeling for radiotherapy: strategies, pitfalls, and challenges.用于放射治疗的放射组学和放射基因组学建模:策略、陷阱与挑战
J Med Imaging (Bellingham). 2021 May;8(3):031902. doi: 10.1117/1.JMI.8.3.031902. Epub 2021 Mar 23.
5
Multistage Segmentation of Prostate Cancer Tissues Using Sample Entropy Texture Analysis.基于样本熵纹理分析的前列腺癌组织多阶段分割
Entropy (Basel). 2020 Dec 4;22(12):1370. doi: 10.3390/e22121370.
6
Multi-Organ Gland Segmentation Using Deep Learning.基于深度学习的多器官腺体分割
Front Med (Lausanne). 2019 Aug 5;6:173. doi: 10.3389/fmed.2019.00173. eCollection 2019.
7
Segmentation and classification of colon glands with deep convolutional neural networks and total variation regularization.基于深度卷积神经网络和全变差正则化的结肠腺分割与分类
PeerJ. 2017 Oct 3;5:e3874. doi: 10.7717/peerj.3874. eCollection 2017.
8
ARCHITECTURAL PATTERNS FOR DIFFERENTIAL DIAGNOSIS OF PROLIFERATIVE BREAST LESIONS FROM HISTOPATHOLOGICAL IMAGES.基于组织病理学图像的乳腺增生性病变鉴别诊断的架构模式
Proc IEEE Int Symp Biomed Imaging. 2017 Apr;2017:152-155. doi: 10.1109/ISBI.2017.7950490. Epub 2017 Jun 19.
9
Light localization properties of weakly disordered optical media using confocal microscopy: application to cancer detection.利用共聚焦显微镜研究弱无序光学介质的光定位特性:在癌症检测中的应用
Opt Express. 2017 Jun 26;25(13):15428-15440. doi: 10.1364/OE.25.015428.
10
Large scale tissue histopathology image classification, segmentation, and visualization via deep convolutional activation features.通过深度卷积激活特征进行大规模组织病理图像分类、分割和可视化
BMC Bioinformatics. 2017 May 26;18(1):281. doi: 10.1186/s12859-017-1685-x.