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从海水中分离得到的 Pontirhabdus pectinivorans 属,新种。

Pontirhabdus pectinivorans gen. nov., sp. nov., isolated from seawater.

机构信息

Institute of Molecular Biology and Genetics, Seoul National University, 599 Kwanak-ro, Kwanak-gu, Seoul 151-742, Republic of Korea.

Division of Biology and Ocean Sciences, Inha University, Incheon 402-751, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2011 Oct;61(Pt 10):2475-2481. doi: 10.1099/ijs.0.027441-0. Epub 2010 Nov 19.

Abstract

A yellow-coloured, rod-shaped, Gram-reaction-negative and aerobic bacterial strain, designated JC2675(T), was isolated from a seawater sample from Jeju Island, Korea. The isolate required sea salts for growth. Gliding motility was observed. Flexirubin-type pigments were absent. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain JC2675(T) represented a distinct phyletic line that reflected a novel generic status within the family Flavobacteraceae with relatively low gene sequence similarities (<95.7 %) to other recognized genera. The predominant isoprenoid quinone (MK-6) and DNA G+C content (30 mol%) were consistent with the assignment of the novel strain to the family Flavobacteriaceae, but overall phenotypic traits demonstrated that the novel strain was not closely affiliated with any previously described genus. Based on data from a study using a polyphasic taxonomic approach, it is proposed that strain JC2675(T) represents a new genus and novel species belonging to the family Flavobacteriaceae, for which the name Pontirhabdus pectinivorans gen. nov., sp. nov. is proposed. The type strain of the type species is JC2675(T) ( = KACC 14153(T) = JCM 17107(T)).

摘要

一株黄色、杆状、革兰氏反应阴性、需盐好氧的细菌菌株,命名为 JC2675(T),从韩国济州岛的海水样本中分离得到。该分离株的生长需要海盐水。观察到滑动运动。不存在 flexirubin 型色素。基于 16S rRNA 基因序列的系统发育分析表明,菌株 JC2675(T)代表了一个独特的进化谱系,反映了在黄杆菌科内具有新颖的属级地位,与其他公认的属的基因序列相似性相对较低(<95.7%)。主要的类异戊二烯醌(MK-6)和 DNA G+C 含量(30 mol%)与将新型菌株分配到黄杆菌科一致,但总体表型特征表明该新型菌株与任何先前描述的属都没有密切关联。基于使用多相分类方法的研究数据,建议菌株 JC2675(T)代表一个新的属和新的种,属于黄杆菌科,提议使用 Pontirhabdus pectinivorans gen. nov.,sp. nov. 作为其名称。模式种的模式菌株为 JC2675(T)(=KACC 14153(T)=JCM 17107(T))。

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