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益生元肽合成中的非随机性

Nonrandomness in prebiotic peptide synthesis.

作者信息

Tyagi S, Ponnamperuma C

机构信息

Department of Chemistry, University of Maryland, College Park 20742.

出版信息

J Mol Evol. 1990 May;30(5):391-9. doi: 10.1007/BF02101111.

DOI:10.1007/BF02101111
PMID:2111852
Abstract

We have synthesized and studied the properties of phosphoanhydrides of alanine with guanosine monophosphate, uridine monophosphate, and adenosine monophosphate. This series of compounds allowed us to investigate the specificity of peptide bound formation in a reaction that could have taken place on the prebiotic earth. We asked whether the intrinsic reactivity of the amino acids, the nature of the nucleotide in the anhydride, or the complementary polynucleotide template influences the specificity of the peptide synthesis reaction. We observed that the differential reactivity of the amino acids results in nearest-neighbor preferences during the peptide synthesis, whereas the nature of the nucleotides and the presence of complementary polynucleotides had no influence on the specificity. These results suggest that some peptides would have been more abundant than others on the prebiotic earth and have implications for the study of the origins of the genetic code and protein synthesis.

摘要

我们合成并研究了丙氨酸与鸟苷一磷酸、尿苷一磷酸和腺苷一磷酸的磷酸酐的性质。这一系列化合物使我们能够研究在可能发生于前生物地球的反应中肽键形成的特异性。我们探讨了氨基酸的内在反应性、酸酐中核苷酸的性质或互补多核苷酸模板是否会影响肽合成反应的特异性。我们观察到,氨基酸的差异反应性导致肽合成过程中出现最近邻偏好,而核苷酸的性质和互补多核苷酸的存在对特异性没有影响。这些结果表明,在前生物地球上,某些肽可能比其他肽更为丰富,这对遗传密码和蛋白质合成起源的研究具有启示意义。

相似文献

1
Nonrandomness in prebiotic peptide synthesis.益生元肽合成中的非随机性
J Mol Evol. 1990 May;30(5):391-9. doi: 10.1007/BF02101111.
2
Prebiotic competition and evolution in self-replicating polynucleotides can explain the properties of DNA/RNA in modern living systems.前生物竞争和自我复制多核苷酸中的进化可以解释现代生命系统中 DNA/RNA 的性质。
BMC Evol Biol. 2020 Jun 26;20(1):75. doi: 10.1186/s12862-020-01641-4.
3
Selective condensation of aminoacyl adenylates by nucleoproteinoid microparticles (prebiotic-lysine-model system-genetic code).通过类核蛋白微粒(益生元赖氨酸模型系统 - 遗传密码)对氨酰腺苷酸进行选择性缩合。
Proc Natl Acad Sci U S A. 1972 Jan;69(1):106-8. doi: 10.1073/pnas.69.1.106.
4
On the origin of biological systems and the role of poly-nucleotides -- the initiation of evolution, the structural basis of the genetic code and the mechanism of protein biosynthesis.论生物系统的起源及多核苷酸的作用——进化的起始、遗传密码的结构基础与蛋白质生物合成机制
Med Hypotheses. 1981 Apr;7(4):455-66. doi: 10.1016/0306-9877(81)90032-3.
5
[Physico-chemical basis of the genetic code origin: stereochemical analysis of interactions of amino acids and nucleotides based on the progene hypothesis].[遗传密码起源的物理化学基础:基于前基因假说的氨基酸与核苷酸相互作用的立体化学分析]
Mol Biol (Mosk). 1988 Sep-Oct;22(5):1411-29.
6
Possibility of genetic coding of amino acid sequences by coherent electronic states in nucleotide chains.
Physiol Chem Phys. 1981;13(2):171-3.
7
Magnesium ion catalyzed P-N bond hydrolysis in imidazolide-activated nucleotides. Relevance to template-directed synthesis of polynucleotides.镁离子催化咪唑酰活化核苷酸中磷氮键的水解。与多核苷酸的模板导向合成的相关性。
J Am Chem Soc. 1989;111(18):7247-57. doi: 10.1021/ja00200a053.
8
A speculation on the origin of the genetic code.关于遗传密码起源的一种推测。
J Theor Biol. 1967 Apr;15(1):41-52. doi: 10.1016/0022-5193(67)90042-2.
9
The fundamental nature of the genetic code: prebiotic interactions between polynucleotides and polyamino acids or their derivatives.遗传密码的基本性质:多核苷酸与多氨基酸或其衍生物之间的益生元相互作用。
Proc Natl Acad Sci U S A. 1968 Jan;59(1):110-7. doi: 10.1073/pnas.59.1.110.
10
Self-instructed condensation of amino acids into polymers.氨基酸的自我指导缩合形成聚合物。
Adv Space Res. 1984;4(12):135-42. doi: 10.1016/0273-1177(84)90555-6.

引用本文的文献

1
Uniquely localized intra-molecular amino acid concentrations at the glycolytic enzyme catalytic/active centers of Archaea, Bacteria and Eukaryota are associated with their proposed temporal appearances on earth.古菌、细菌和真核生物糖酵解酶催化/活性中心独特的分子内氨基酸浓度与它们在地球上的预期出现时间有关。
Orig Life Evol Biosph. 2013 Apr;43(2):161-87. doi: 10.1007/s11084-013-9331-8. Epub 2013 May 29.
2
Protein evolution: intrinsic preferences in peptide bond formation: a computational and experimental analysis.蛋白质进化:肽键形成中的内在偏好:一项计算与实验分析
J Biosci. 2003 Dec;28(6):683-90. doi: 10.1007/BF02708428.
3

本文引用的文献

1
The synthesis and some properties of amino acyl adenylates.氨基酰腺苷酸的合成及其某些性质
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Hydrolytic properties of phenylalanyl- and N-acetylphenylalanyl adenylate anhydrides.苯丙氨酰和N-乙酰苯丙氨酰腺苷酸酐的水解特性。
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Life from an orderly cosmos.生命源于有序的宇宙。
The origin of the genetic code and protein synthesis.
遗传密码与蛋白质合成的起源。
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Experimental studies on the origin of the genetic code and the process of protein synthesis: a review update.遗传密码的起源与蛋白质合成过程的实验研究:综述更新
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Evolution of early mechanisms of translation of genetic information into polypeptides.遗传信息转化为多肽的早期翻译机制的演变。
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Origins of translation: the hypothesis of permanently attached adaptors.
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Binding constants of phenylalanine for the four mononucleotides.苯丙氨酸与四种单核苷酸的结合常数。
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Experimental studies related to the origin of the genetic code and the process of protein synthesis--a review.关于遗传密码起源和蛋白质合成过程的实验研究——综述
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Infrared study of G . C complex formation in template-dependent oligo(G) synthesis.模板依赖性寡聚(G)合成中G.C复合物形成的红外研究。
J Mol Biol. 1982 Nov 25;162(1):219-30. doi: 10.1016/0022-2836(82)90170-x.
9
Catalysis of accurate poly(C)-directed synthesis of 3'-5'-linked oligoguanylates by Zn2+.锌离子催化以聚胞嘧啶为模板精确合成3'-5'连接的寡聚鸟苷酸。
J Mol Biol. 1980 Dec 25;144(4):567-77. doi: 10.1016/0022-2836(80)90337-x.
10
Non-enzymatic template-directed synthesis on RNA random copolymers. Poly(C, U) templates.RNA随机共聚物上的非酶模板导向合成。聚(C,U)模板。
J Mol Biol. 1984 Jun 25;176(2):279-306. doi: 10.1016/0022-2836(84)90425-x.