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Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes.全基因组范围内对组蛋白乙酰转移酶(HATs)和组蛋白去乙酰化酶(HDACs)的图谱绘制揭示了它们在活跃基因和非活跃基因中的不同功能。
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GCN5/PCAF 介导的 H3K9ac 和 CBP/p300 介导的 H3K18/27ac 在核受体转录激活中的不同作用。

Distinct roles of GCN5/PCAF-mediated H3K9ac and CBP/p300-mediated H3K18/27ac in nuclear receptor transactivation.

机构信息

Nuclear Receptor Biology Section, CEB, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD, USA.

出版信息

EMBO J. 2011 Jan 19;30(2):249-62. doi: 10.1038/emboj.2010.318. Epub 2010 Dec 3.

DOI:10.1038/emboj.2010.318
PMID:21131905
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3025463/
Abstract

Histone acetyltransferases (HATs) GCN5 and PCAF (GCN5/PCAF) and CBP and p300 (CBP/p300) are transcription co-activators. However, how these two distinct families of HATs regulate gene activation remains unclear. Here, we show deletion of GCN5/PCAF in cells specifically and dramatically reduces acetylation on histone H3K9 (H3K9ac) while deletion of CBP/p300 specifically and dramatically reduces acetylations on H3K18 and H3K27 (H3K18/27ac). A ligand for nuclear receptor (NR) PPARδ induces sequential enrichment of H3K18/27ac, RNA polymerase II (Pol II) and H3K9ac on PPARδ target gene Angptl4 promoter, which correlates with a robust Angptl4 expression. Inhibiting transcription elongation blocks ligand-induced H3K9ac, but not H3K18/27ac, on the Angptl4 promoter. Finally, we show GCN5/PCAF and GCN5/PCAF-mediated H3K9ac correlate with, but are surprisingly dispensable for, NR target gene activation. In contrast, CBP/p300 and their HAT activities are essential for ligand-induced Pol II recruitment on, and activation of, NR target genes. These results highlight the substrate and site specificities of HATs in cells, demonstrate the distinct roles of GCN5/PCAF- and CBP/p300-mediated histone acetylations in gene activation, and suggest an important role of CBP/p300-mediated H3K18/27ac in NR-dependent transcription.

摘要

组蛋白乙酰转移酶(HATs)GCN5 和 PCAF(GCN5/PCAF)和 CBP 和 p300(CBP/p300)是转录共激活因子。然而,这两种不同家族的 HATs 如何调节基因激活仍不清楚。在这里,我们显示细胞特异性缺失 GCN5/PCAF 会显著降低组蛋白 H3K9(H3K9ac)的乙酰化,而特异性缺失 CBP/p300 会显著降低 H3K18 和 H3K27(H3K18/27ac)的乙酰化。核受体(NR)PPARδ 的配体诱导 H3K18/27ac、RNA 聚合酶 II(Pol II)和 H3K9ac 在 PPARδ 靶基因 Angptl4 启动子上的顺序富集,这与 Angptl4 的表达增强相关。抑制转录延伸会阻断配体诱导的 Angptl4 启动子上的 H3K9ac,但不阻断 H3K18/27ac。最后,我们发现 GCN5/PCAF 和 GCN5/PCAF 介导的 H3K9ac 与 NR 靶基因激活相关,但令人惊讶的是,GCN5/PCAF 是 NR 靶基因激活所必需的。相比之下,CBP/p300 及其 HAT 活性对于配体诱导的 Pol II 在 NR 靶基因上的募集和激活是必不可少的。这些结果突出了细胞中 HATs 的底物和位点特异性,证明了 GCN5/PCAF 和 CBP/p300 介导的组蛋白乙酰化在基因激活中的独特作用,并提示了 CBP/p300 介导的 H3K18/27ac 在 NR 依赖性转录中的重要作用。