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CBP介导的组蛋白H3赖氨酸27乙酰化拮抗果蝇多梳沉默。

CBP-mediated acetylation of histone H3 lysine 27 antagonizes Drosophila Polycomb silencing.

作者信息

Tie Feng, Banerjee Rakhee, Stratton Carl A, Prasad-Sinha Jayashree, Stepanik Vincent, Zlobin Andrei, Diaz Manuel O, Scacheri Peter C, Harte Peter J

机构信息

Department of Genetics, Case Western Reserve University, Cleveland, OH 44106, USA.

出版信息

Development. 2009 Sep;136(18):3131-41. doi: 10.1242/dev.037127.


DOI:10.1242/dev.037127
PMID:19700617
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2730368/
Abstract

Trimethylation of histone H3 lysine 27 (H3K27me3) by Polycomb repressive complex 2 (PRC2) is essential for transcriptional silencing of Polycomb target genes, whereas acetylation of H3K27 (H3K27ac) has recently been shown to be associated with many active mammalian genes. The Trithorax protein (TRX), which associates with the histone acetyltransferase CBP, is required for maintenance of transcriptionally active states and antagonizes Polycomb silencing, although the mechanism underlying this antagonism is unknown. Here we show that H3K27 is specifically acetylated by Drosophila CBP and its deacetylation involves RPD3. H3K27ac is present at high levels in early embryos and declines after 4 hours as H3K27me3 increases. Knockdown of E(Z) decreases H3K27me3 and increases H3K27ac in bulk histones and at the promoter of the repressed Polycomb target gene abd-A, suggesting that these indeed constitute alternative modifications at some H3K27 sites. Moderate overexpression of CBP in vivo causes a global increase in H3K27ac and a decrease in H3K27me3, and strongly enhances Polycomb mutant phenotypes. We also show that TRX is required for H3K27 acetylation. TRX overexpression also causes an increase in H3K27ac and a concomitant decrease in H3K27me3 and leads to defects in Polycomb silencing. Chromatin immunoprecipitation coupled with DNA microarray (ChIP-chip) analysis reveals that H3K27ac and H3K27me3 are mutually exclusive and that H3K27ac and H3K4me3 signals coincide at most sites. We propose that TRX-dependent acetylation of H3K27 by CBP prevents H3K27me3 at Polycomb target genes and constitutes a key part of the molecular mechanism by which TRX antagonizes or prevents Polycomb silencing.

摘要

多梳抑制复合物2(PRC2)介导的组蛋白H3赖氨酸27(H3K27me3)三甲基化对于多梳靶基因的转录沉默至关重要,而H3K27的乙酰化(H3K27ac)最近已被证明与许多活跃的哺乳动物基因相关。与组蛋白乙酰转移酶CBP相关的三体胸蛋白(TRX)是维持转录活性状态所必需的,并且拮抗多梳沉默,尽管这种拮抗作用的潜在机制尚不清楚。在这里,我们表明果蝇CBP特异性地使H3K27乙酰化,其去乙酰化涉及RPD3。H3K27ac在早期胚胎中高水平存在,并在4小时后随着H3K27me3增加而下降。敲低E(Z)会降低整体组蛋白中的H3K27me3并增加H3K27ac,同时也会增加被抑制的多梳靶基因abd - A启动子处的H3K27ac,这表明在某些H3K27位点,这些确实构成了替代修饰。体内适度过表达CBP会导致H3K27ac整体增加和H3K27me3减少,并强烈增强多梳突变体表型。我们还表明TRX是H3K27乙酰化所必需的。TRX过表达也会导致H3K27ac增加,同时H3K27me3减少,并导致多梳沉默缺陷。染色质免疫沉淀结合DNA微阵列(ChIP-chip)分析表明,H3K27ac和H3K27me3相互排斥,并且在大多数位点H3K27ac和H3K4me3信号重合。我们提出,CBP依赖TRX的H3K27乙酰化可防止多梳靶基因处的H3K27me3,并且构成了TRX拮抗或阻止多梳沉默的分子机制的关键部分。

相似文献

[1]
CBP-mediated acetylation of histone H3 lysine 27 antagonizes Drosophila Polycomb silencing.

Development. 2009-9

[2]
A mutation in the E(Z) methyltransferase that increases trimethylation of histone H3 lysine 27 and causes inappropriate silencing of active Polycomb target genes.

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[3]
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Mol Cell Biol. 2012-4-9

[4]
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Development. 2014-3

[5]
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Proc Natl Acad Sci U S A. 2016-2-9

[6]
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[7]
Alternative epigenetic chromatin states of polycomb target genes.

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[8]
Drosophila Kismet regulates histone H3 lysine 27 methylation and early elongation by RNA polymerase II.

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[9]
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Mol Cell. 2016-7-21

[10]
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Mol Cell Biol. 2007-3

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本文引用的文献

[1]
Drosophila Kismet regulates histone H3 lysine 27 methylation and early elongation by RNA polymerase II.

PLoS Genet. 2008-10

[2]
Combinatorial patterns of histone acetylations and methylations in the human genome.

Nat Genet. 2008-7

[3]
Drosophila ESC-like can substitute for ESC and becomes required for Polycomb silencing if ESC is absent.

Dev Biol. 2008-1-1

[4]
Drosophila UTX is a histone H3 Lys27 demethylase that colocalizes with the elongating form of RNA polymerase II.

Mol Cell Biol. 2008-2

[5]
The Arabidopsis homologs of trithorax (ATX1) and enhancer of zeste (CLF) establish 'bivalent chromatin marks' at the silent AGAMOUS locus.

Nucleic Acids Res. 2007

[6]
Demethylation of H3K27 regulates polycomb recruitment and H2A ubiquitination.

Science. 2007-10-19

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UTX and JMJD3 are histone H3K27 demethylases involved in HOX gene regulation and development.

Nature. 2007-10-11

[8]
Global assessment of combinatorial post-translational modification of core histones in yeast using contemporary mass spectrometry. LYS4 trimethylation correlates with degree of acetylation on the same H3 tail.

J Biol Chem. 2007-9-21

[9]
A chromatin landmark and transcription initiation at most promoters in human cells.

Cell. 2007-7-13

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Extraction, purification and analysis of histones.

Nat Protoc. 2007

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