Department of Ecology and Evolutionary Biology, University of Arizona, AZ, USA.
Mol Biol Evol. 2011 May;28(5):1675-86. doi: 10.1093/molbev/msq348. Epub 2010 Dec 24.
The X chromosome plays an important role in both adaptive evolution and speciation. We used a molecular evolutionary screen of X-linked genes potentially involved in reproductive isolation in mice to identify putative targets of recurrent positive selection. We then sequenced five very rapidly evolving genes within and between several closely related species of mice in the genus Mus. All five genes were involved in male reproduction and four of the genes showed evidence of recurrent positive selection. The most remarkable evolutionary patterns were found at Testis-specific gene a8 (Tsga8), a spermatogenesis-specific gene expressed during postmeiotic chromatin condensation and nuclear transformation. Tsga8 was characterized by extremely high levels of insertion-deletion variation of an alanine-rich repetitive motif in natural populations of Mus domesticus and M. musculus, differing in length from the reference mouse genome by up to 89 amino acids (27% of the total protein length). This population-level variation was coupled with striking divergence in protein sequence and length between closely related mouse species. Although no clear orthologs had previously been described for Tsga8 in other mammalian species, we have identified a highly divergent hypothetical gene on the rat X chromosome that shares clear orthology with the 5' and 3' ends of Tsga8. Further inspection of this ortholog verified that it is expressed in rat testis and shares remarkable similarity with mouse Tsga8 across several general features of the protein sequence despite no conservation of nucleotide sequence across over 60% of the rat-coding domain. Overall, Tsga8 appears to be one of the most rapidly evolving genes to have been described in rodents. We discuss the potential evolutionary causes and functional implications of this extraordinary divergence and the possible contribution of Tsga8 and the other four genes we examined to reproductive isolation in mice.
X 染色体在适应性进化和物种形成中都起着重要作用。我们使用了一种可能涉及小鼠生殖隔离的 X 连锁基因的分子进化筛选方法,以鉴定潜在的正选择靶点。然后,我们对几种亲缘关系密切的小鼠属内和属间的五个快速进化基因进行了测序。这五个基因都与雄性生殖有关,其中四个基因显示出正选择的证据。最显著的进化模式出现在睾丸特异性基因 a8(Tsga8)上,该基因在减数后染色质浓缩和核转化期间表达,具有精子发生特异性。Tsga8 的特征是在自然种群中存在高度丰富的插入缺失变化,这些变化存在于富含丙氨酸的重复基序中,与参考鼠基因组相比,长度差异高达 89 个氨基酸(全长的 27%)。这种群体水平的变异与亲缘关系密切的小鼠物种之间的蛋白质序列和长度的显著差异有关。尽管之前在其他哺乳动物物种中没有描述过 Tsga8 的明显同源物,但我们在大鼠 X 染色体上发现了一个高度分化的假设基因,它与 Tsga8 的 5'和 3'末端具有明显的同源性。对这个同源物的进一步检查证实,它在大鼠睾丸中表达,尽管在超过 60%的大鼠编码域中没有核苷酸序列的保守性,但与小鼠 Tsga8 具有显著的相似性,跨越了蛋白质序列的几个一般特征。总体而言,Tsga8 似乎是在啮齿动物中描述的进化最快的基因之一。我们讨论了这种非凡的分化的潜在进化原因和功能意义,以及 Tsga8 和我们研究的其他四个基因对小鼠生殖隔离的可能贡献。