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碲-碱基修饰的寡脱氧核苷酸的合成、结构与成像。

Synthesis, structure and imaging of oligodeoxyribonucleotides with tellurium-nucleobase derivatization.

机构信息

Department of Chemistry, Georgia State University, Atlanta, GA 30303, USA.

出版信息

Nucleic Acids Res. 2011 May;39(9):3962-71. doi: 10.1093/nar/gkq1288. Epub 2011 Jan 17.

DOI:10.1093/nar/gkq1288
PMID:21245037
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3089452/
Abstract

We report here the first synthesis of 5-phenyl-telluride-thymidine derivatives and the Te-phosphoramidite. We also report here the synthesis, structure and STM current-imaging studies of DNA oligonucleotides containing the nucleobases (thymine) derivatized with 5-phenyl-telluride functionality (5-Te). Our results show that the 5-Te-DNA is stable, and that the Te-DNA duplex has the thermo-stability similar to the corresponding native duplex. The crystal structure indicates that the 5-Te-DNA duplex structure is virtually identical to the native one, and that the Te-modified T and native A interact similarly to the native T and A pair. Furthermore, while the corresponding native showed weak signals, the DNA duplex modified with electron-rich tellurium functionality showed strong topographic and current peaks by STM imaging, suggesting a potential strategy to directly image DNA without structural perturbation.

摘要

我们首次合成了 5-苯基碲代胸苷衍生物和碲亚磷酸酯。我们还报告了含有(胸腺嘧啶)衍生 5-苯基碲功能化的寡核苷酸的合成、结构和 STM 电流成像研究。我们的结果表明,5-Te-DNA 是稳定的,并且 Te-DNA 双链体具有与相应天然双链体相似的热稳定性。晶体结构表明,5-Te-DNA 双链体结构几乎与天然双链体相同,并且 Te 修饰的 T 和天然的 A 与天然的 T 和 A 对相互作用相似。此外,虽然相应的天然物显示出较弱的信号,但用富电子碲官能团修饰的 DNA 双链体通过 STM 成像显示出强烈的形貌和电流峰,这表明了一种无需结构干扰即可直接成像 DNA 的潜在策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/755061f2d40e/gkq1288f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/946dc9f81713/gkq1288s1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/069d7d2f9c0e/gkq1288f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/33eb9336f005/gkq1288f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/7c7da58a30d9/gkq1288f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/c3178cfc9b44/gkq1288f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/ffae2b3dc414/gkq1288f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/797e6e637444/gkq1288f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/755061f2d40e/gkq1288f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/946dc9f81713/gkq1288s1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/069d7d2f9c0e/gkq1288f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/33eb9336f005/gkq1288f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/7c7da58a30d9/gkq1288f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/c3178cfc9b44/gkq1288f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/ffae2b3dc414/gkq1288f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/797e6e637444/gkq1288f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7906/3089452/755061f2d40e/gkq1288f7.jpg

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本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
A contractile electronic switch made of DNA.由 DNA 制成的可收缩电子开关。
J Am Chem Soc. 2010 Mar 3;132(8):2663-71. doi: 10.1021/ja908508j.
3
High fidelity of base pairing by 2-selenothymidine in DNA.2-硒代胸腺嘧啶核苷在 DNA 中碱基配对的高保真度。
碲衍生的亚磷酰胺的合成及其掺入DNA寡核苷酸中。
Curr Protoc Nucleic Acid Chem. 2011 Dec;Chapter 1:Unit 1.25.1-16. doi: 10.1002/0471142700.nc0125s47.
4
Facile synthesis of nucleoside 5'-(α-P-seleno)-triphosphates and phosphoroselenoate RNA transcription.核苷 5'-(α-P-硒代)-三磷酸酯和磷硒代酸酯 RNA 转录的简便合成。
RNA. 2011 Oct;17(10):1932-8. doi: 10.1261/rna.2719311. Epub 2011 Aug 26.
J Am Chem Soc. 2010 Feb 24;132(7):2120-1. doi: 10.1021/ja909330m.
4
Nanopore based sequence specific detection of duplex DNA for genomic profiling.基于纳米孔的双链 DNA 序列特异性检测用于基因组分析。
Nano Lett. 2010 Feb 10;10(2):738-42. doi: 10.1021/nl100058y.
5
Crystallographic studies of chemically modified nucleic acids: a backward glance.化学修饰核酸的晶体学研究:回眸
Chem Biodivers. 2010 Jan;7(1):60-89. doi: 10.1002/cbdv.200900177.
6
RNAi-based therapeutics-current status, challenges and prospects.基于 RNAi 的治疗方法——现状、挑战与展望。
EMBO Mol Med. 2009 Jun;1(3):142-51. doi: 10.1002/emmm.200900023.
7
Synthesis and crystal structure of 2'-se-modified guanosine containing DNA.2'-SE 修饰的含鸟苷的 DNA 的合成与晶体结构。
J Org Chem. 2010 Feb 5;75(3):637-41. doi: 10.1021/jo902190c.
8
Expanded genetic alphabets in the polymerase chain reaction.聚合酶链反应中的扩展遗传字母。
Angew Chem Int Ed Engl. 2010;49(1):177-80. doi: 10.1002/anie.200905173.
9
From molecular to macroscopic via the rational design of a self-assembled 3D DNA crystal.通过自组装三维DNA晶体的合理设计,从分子层面到宏观层面。
Nature. 2009 Sep 3;461(7260):74-7. doi: 10.1038/nature08274.
10
Synthesis of the first tellurium-derivatized oligonucleotides for structural and functional studies.合成首例碲原子修饰的寡核苷酸,用于结构和功能研究。
Chemistry. 2009 Oct 5;15(39):10210-6. doi: 10.1002/chem.200900774.