Department of Zoology, University of Oxford, South Parks Road, Oxford, OX1 3PS, UK.
Protist. 2011 Apr;162(2):332-72. doi: 10.1016/j.protis.2010.10.002. Epub 2011 Feb 4.
We describe three new orders of filosan Cercozoa, five new deep-branching genera, eight new species of Thaumatomonas, Reckertia, Spongomonas, Rhogostoma, Agitata, Neoheteromita and Paracercomonas, sequence their 18S rDNA, and construct 18S rDNA trees for 148 Cercozoa. Our phylogeny indicates that Filosa were ancestrally gliding flagellates; non-flagellate filose amoebae evolved from them five times independently. The new genera are more closely related to environmental DNA sequences than cultured organisms. Tremula longifila, a zooflagellate glider on both flagella (unlike other Cercozoa), is the most divergent filosan (Tremulida ord. n.). Micrometopion nutans is a eukaryote-eating gliding zooflagellate like Metopion and Metromonas. Minimassisteria diva is a widespread trimorphic marine amoeboflagellate granofilosan. Peregrinia clavideferens, a non-testate, scale-bearing, filose amoeba, branches deeply in Thaumatomonadida, which are probably sisters to Spongomonadida. Nudifila producta is a filose amoeboflagellate related to Clautriavia and Marimonadida (ord. n., e.g. Pseudopirsonia, Auranticordis). We substantially revise Imbricatea, now including Spongomonadida, and Thecofilosea to include Phaeodaria. Thecofilosea and Imbricatea and Thecofilosea are sisters, both arguably ancestrally rigid gliding flagellates with ventral pseudopod-emitting grooves. Scale-free Ovulinata parva is sister to Paulinella, so imbricate silica scales can be lost. Internal hollow silica skeletons evolved twice in Thecofilosea (Ebriida, Phaeodaria) or were multiply lost. Protaspa replaces preoccupied 'Protaspis'.
我们描述了三新目 Filosoa 纤毛虫、五新深分枝属、八新种 Thaumatomonas、Reckertia、Spongomonas、Rhogostoma、Agitata、Neoheteromita 和 Paracercomonas,测定了它们的 18S rDNA 序列,并为 148 种纤毛虫构建了 18S rDNA 树。我们的系统发育表明,Filosoa 是原生的滑行鞭毛虫;五次独立地从它们演化出了非鞭毛的丝状纤毛虫。新属与环境 DNA 序列的亲缘关系比培养生物更密切。长鞭毛 Tremula longifila,一对泳动鞭毛的游动动物鞭毛虫(不同于其他 Cercozoa),是最具差异性的纤毛虫(Tremulida 目)。食真核生物的游动动物鞭毛虫 Micrometopion nutans 与 Metopion 和 Metromonas 相似。海洋三型变形虫 Minimassisteria diva 是一种广泛分布的海生有孔虫变形鞭毛虫。Peregrinia clavideferens,一种无甲壳、具鳞片、丝状的阿米巴,在 Thaumatomonadida 中深分枝,可能是 Spongomonadida 的姐妹群。具刚毛的游动阿米巴 Nudifila producta 与 Clautriavia 和 Marimonadida(新目,如 Pseudopirsonia、Auranticordis)有关。我们大幅修订了 Imbricatea,现在包括了 Spongomonadida,以及 Thecofilosea 以包含 Phaeodaria。Thecofilosea 和 Imbricatea 以及 Thecofilosea 是姐妹群,两者都可能是原生的刚性滑行鞭毛虫,腹面有假伪足发出的凹槽。无刚毛的 Ovulinata parva 与 Paulinella 姐妹群,因此,纤毛状的硅质鳞片可以丢失。Thecofilosea 中两次演化出内部中空的硅质骨骼(Ebriida、Phaeodaria)或多次丢失。Protaspa 取代了被占有的‘Protaspis’。