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可变弧菌新种和海洋弧菌新种,从加勒比海葵中分离得到。

Vibrio variabilis sp. nov. and Vibrio maritimus sp. nov., isolated from Palythoa caribaeorum.

机构信息

BCCM/LMG Bacteria Collection, Ghent University, K. L. Ledeganckstraat 35, B-9000 Ghent, Belgium.

Department of Genetics, Evolution and Bioagents, Institute of Biology, State University of Campinas (UNICAMP), Campinas, Brazil.

出版信息

Int J Syst Evol Microbiol. 2011 Dec;61(Pt 12):3009-3015. doi: 10.1099/ijs.0.026997-0. Epub 2011 Feb 4.

Abstract

Two novel vibrio isolates (R-40492(T) and R-40493(T)) originating from the zoanthid Palythoa caribaeorum in Brazil in 2005 were taxonomically characterized by means of a polyphasic approach comprising multilocus sequence analysis (MLSA), DNA-DNA hybridization (DDH), ΔT(m) analysis and phenotypic characterization. Phylogenetic analysis based on 16S rRNA gene sequences showed that R-40492(T) and R-40493(T) fell within the genus Vibrio and were most closely related to each other with 99% similarity; similarities of these two novel isolates towards Vibrio neptunius LMG 20536(T), Vibrio coralliilyticus LMG 20984(T), Vibrio nigripulchritudo LMG 3896(T), Vibrio sinaloensis LMG 25238(T) and Vibrio brasiliensis LMG 20546(T) varied between 97.1 and 98.5%. DDH experiments showed that the two isolates had less than 15% relatedness to the phylogenetically most closely related Vibrio species. R-40492(T) and R-40493(T) had 55-57% relatedness to each other. The ΔT(m) between R-40492(T) and R-40493(T) was 6.12 °C. In addition, MLSA of concatenated sequences (16S rRNA, ftsZ, gyrB, recA, rpoA, topA, pyrH and mreB; 6035 bp in length) showed that the two novel isolates formed a separate branch with less than 92% concatenated gene sequence similarity towards known species of vibrios. Two novel species are proposed to accommodate these novel isolates, namely Vibrio variabilis sp. nov. (type strain, R-40492(T)=LMG 25438(T)=CAIM 1454(T)) and Vibrio maritimus sp. nov. (type strain, R-40493(T)=LMG 25439(T)=CAIM 1455(T)).

摘要

2005 年,从巴西的软珊瑚 Palythoa caribaeorum 中分离到两株新的弧菌(R-40492(T) 和 R-40493(T)),通过多相分类方法进行了分类学特征描述,包括多位点序列分析(MLSA)、DNA-DNA 杂交(DDH)、ΔT(m)分析和表型特征。基于 16S rRNA 基因序列的系统发育分析表明,R-40492(T) 和 R-40493(T) 属于弧菌属,彼此之间的相似度最高,为 99%;这两个新分离株与 Vibrio neptunius LMG 20536(T)、Vibrio coralliilyticus LMG 20984(T)、Vibrio nigripulchritudo LMG 3896(T)、Vibrio sinaloensis LMG 25238(T) 和 Vibrio brasiliensis LMG 20546(T) 的相似性在 97.1%至 98.5%之间。DDH 实验表明,这两个分离株与亲缘关系最密切的弧菌种之间的相关性小于 15%。R-40492(T) 和 R-40493(T) 彼此之间的相关性为 55-57%。R-40492(T) 和 R-40493(T) 之间的ΔT(m)为 6.12°C。此外,串联序列(16S rRNA、ftsZ、gyrB、recA、rpoA、topA、pyrH 和 mreB;6035 bp 长)的 MLSA 表明,这两个新分离株形成了一个单独的分支,与已知的弧菌种的串联基因序列相似性小于 92%。拟议容纳这两个新分离株的两个新物种是 Vibrio variabilis sp. nov.(模式株,R-40492(T)=LMG 25438(T)=CAIM 1454(T))和 Vibrio maritimus sp. nov.(模式株,R-40493(T)=LMG 25439(T)=CAIM 1455(T))。

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