Department of Biochemistry, University of Wisconsin, School of Medicine and Public Health, Madision, WI 53706, USA.
J Biol Chem. 2011 Apr 8;286(14):12075-85. doi: 10.1074/jbc.M110.210187. Epub 2011 Feb 5.
Bacterial "maintenance of genome stability protein A" (MgsA) and related eukaryotic enzymes play important roles in cellular responses to stalled DNA replication processes. Sequence information identifies MgsA enzymes as members of the clamp loader clade of AAA+ proteins, but structural information defining the family has been limited. Here, the x-ray crystal structure of Escherichia coli MgsA is described, revealing a homotetrameric arrangement for the protein that distinguishes it from other clamp loader clade AAA+ proteins. Each MgsA protomer is composed of three elements as follows: ATP-binding and helical lid domains (conserved among AAA+ proteins) and a tetramerization domain. Although the tetramerization domains bury the greatest amount of surface area in the MgsA oligomer, each of the domains participates in oligomerization to form a highly intertwined quaternary structure. Phosphate is bound at each AAA+ ATP-binding site, but the active sites do not appear to be in a catalytically competent conformation due to displacement of Arg finger residues. E. coli MgsA is also shown to form a complex with the single-stranded DNA-binding protein through co-purification and biochemical studies. MgsA DNA-dependent ATPase activity is inhibited by single-stranded DNA-binding protein. Together, these structural and biochemical observations provide insights into the mechanisms of MgsA family AAA+ proteins.
细菌“基因组稳定蛋白 A”(MgsA)和相关的真核酶在细胞对停滞的 DNA 复制过程的反应中发挥重要作用。序列信息将 MgsA 酶鉴定为 AAA+ 蛋白的夹钳加载器类别的成员,但定义该家族的结构信息有限。本文描述了大肠杆菌 MgsA 的 X 射线晶体结构,揭示了该蛋白的四聚体排列,使其与其他夹钳加载器类 AAA+ 蛋白区分开来。每个 MgsA 原聚体由以下三个元素组成:ATP 结合和螺旋盖结构域(在 AAA+ 蛋白中保守)和四聚化结构域。尽管四聚化结构域在 MgsA 寡聚体中埋藏了最大的表面积,但每个结构域都参与寡聚化以形成高度交织的四级结构。磷酸盐结合在每个 AAA+ ATP 结合位点,但由于 Arg 手指残基的位移,活性位点似乎没有处于催化活性构象。通过共纯化和生化研究还表明,大肠杆菌 MgsA 还与单链 DNA 结合蛋白形成复合物。MgsA 的 DNA 依赖性 ATP 酶活性受到单链 DNA 结合蛋白的抑制。这些结构和生化观察结果共同为 MgsA 家族 AAA+ 蛋白的机制提供了深入的了解。