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玫瑰链孢囊菌模式菌株(NI 9100)的全基因组序列

Complete genome sequence of Streptosporangium roseum type strain (NI 9100).

作者信息

Nolan Matt, Sikorski Johannes, Jando Marlen, Lucas Susan, Lapidus Alla, Glavina Del Rio Tijana, Chen Feng, Tice Hope, Pitluck Sam, Cheng Jan-Fang, Chertkov Olga, Sims David, Meincke Linda, Brettin Thomas, Han Cliff, Detter John C, Bruce David, Goodwin Lynne, Land Miriam, Hauser Loren, Chang Yun-Juan, Jeffries Cynthia D, Ivanova Natalia, Mavromatis Konstantinos, Mikhailova Natalia, Chen Amy, Palaniappan Krishna, Chain Patrick, Rohde Manfred, Göker Markus, Bristow Jim, Eisen Jonathan A, Markowitz Victor, Hugenholtz Philip, Kyrpides Nikos C, Klenk Hans-Peter

出版信息

Stand Genomic Sci. 2010 Jan 28;2(1):29-37. doi: 10.4056/sigs.631049.

Abstract

Streptosporangium roseum Crauch 1955 is the type strain of the species which is the type species of the genus Streptosporangium. The 'pinkish coiled Streptomyces-like organism with a spore case' was isolated from vegetable garden soil in 1955. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a member of the family Streptosporangiaceae, and the second largest microbial genome sequence ever deciphered. The 10,369,518 bp long genome with its 9421 protein-coding and 80 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

摘要

玫瑰孢囊链霉菌(Streptosporangium roseum)Crauch 1955是该物种的模式菌株,而该物种是孢囊链霉菌属(Streptosporangium)的模式种。这种“带有孢子囊的粉红色螺旋状类似链霉菌的生物体”于1955年从菜园土壤中分离出来。在此,我们描述该生物体的特征,以及完整的基因组序列和注释。这是孢囊链霉菌科成员的首个完整基因组序列,也是有史以来破译的第二大微生物基因组序列。这个长度为10,369,518 bp的基因组,包含9421个蛋白质编码基因和80个RNA基因,是细菌和古菌基因组百科全书项目的一部分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7f10/3035251/b7ab8ca3b094/sigs.631049-f1a.jpg

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