Department of Epidemiology and Public Health, Centre for Molecular Epidemiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore.
Hum Genet. 2011 Apr;129(4):351-70. doi: 10.1007/s00439-011-0964-2. Epub 2011 Feb 18.
Over the past several years, more focus has been placed on dissecting the genetic basis of complex diseases and traits through genome-wide association studies. In contrast, Mendelian disorders have received little attention mainly due to the lack of newer and more powerful methods to study these disorders. Linkage studies have previously been the main tool to elucidate the genetics of Mendelian disorders; however, extremely rare disorders or sporadic cases caused by de novo variants are not amendable to this study design. Exome sequencing has now become technically feasible and more cost-effective due to the recent advances in high-throughput sequence capture methods and next-generation sequencing technologies which have offered new opportunities for Mendelian disorder research. Exome sequencing has been swiftly applied to the discovery of new causal variants and candidate genes for a number of Mendelian disorders such as Kabuki syndrome, Miller syndrome and Fowler syndrome. In addition, de novo variants were also identified for sporadic cases, which would have not been possible without exome sequencing. Although exome sequencing has been proven to be a promising approach to study Mendelian disorders, several shortcomings of this method must be noted, such as the inability to capture regulatory or evolutionary conserved sequences in non-coding regions and the incomplete capturing of all exons.
在过去的几年中,人们越来越关注通过全基因组关联研究来剖析复杂疾病和特征的遗传基础。相比之下,孟德尔疾病受到的关注较少,主要是因为缺乏更新、更强大的方法来研究这些疾病。连锁研究一直是阐明孟德尔疾病遗传学的主要工具;然而,由于新技术的缺乏,非常罕见的疾病或由新生变异引起的散发病例无法采用这种研究设计。由于高通量序列捕获方法和下一代测序技术的最新进展,外显子组测序在技术上已经变得可行,并且成本效益更高,这为孟德尔疾病研究提供了新的机会。外显子组测序已迅速应用于许多孟德尔疾病(如歌舞伎综合征、米勒综合征和福勒综合征)的新致病变异和候选基因的发现。此外,还鉴定了散发性病例中的新生变异,如果没有外显子组测序,这是不可能的。尽管外显子组测序已被证明是一种研究孟德尔疾病的很有前途的方法,但必须注意到该方法存在一些缺点,例如无法捕获非编码区域中的调控序列或进化保守序列,以及无法完全捕获所有外显子。