Department of Pharmacy, Uppsala University , Uppsala Biomedical Center, P.O. Box 580, SE-75123 Uppsala, Sweden.
Mol Pharm. 2011 Apr 4;8(2):498-506. doi: 10.1021/mp100339c. Epub 2011 Mar 18.
We present a novel computational tool which predicts the glass-forming ability of drug compounds solely from their molecular structure. Compounds which show solid-state limited aqueous solubility were selected, and their glass-forming ability was determined upon spray-drying, melt-quenching and mechanical activation. The solids produced were analyzed by differential scanning calorimetry (DSC) and powder X-ray diffraction. Compounds becoming at least partially amorphous on processing were classified as glass-formers, whereas those remaining crystalline regardless of the process method were classified as non-glass-forming compounds. A predictive model of the glass-forming ability, designed to separate between these two classes, was developed through the use of partial least-squares projection to latent structure discriminant analysis (PLS-DA) and calculated molecular descriptors. In total, ten of the 16 compounds were determined experimentally to be good glass-formers and the PLS-DA model correctly sorted 15 of the compounds using four molecular descriptors only. An external test set was predicted with an accuracy of 75%, and, hence, the PLS-DA model developed was shown to be applicable for the identification of compounds that have the potential to be designed as amorphous formulations. The model suggests that larger molecules with a low number of benzene rings, low level of molecular symmetry, branched carbon skeletons and electronegative atoms have the ability to form a glass. To conclude, we have developed a predictive, transparent and interpretable computational model for the identification of drug molecules capable of being glass-formers. The model allows an assessment of amorphization as a formulation strategy in the early drug development process, and can be applied before compound synthesis.
我们提出了一种新颖的计算工具,仅通过药物化合物的分子结构即可预测其成玻璃能力。选择了显示固态有限水溶解度的化合物,并通过喷雾干燥,熔融淬火和机械活化来确定其成玻璃能力。通过差示扫描量热法(DSC)和粉末 X 射线衍射对所制得的固体进行分析。将在加工过程中至少部分无定形的化合物分类为成玻璃化合物,而无论处理方法如何,仍保持结晶状态的化合物则分类为不成玻璃化合物。通过使用偏最小二乘投影到潜在结构判别分析(PLS-DA)和计算分子描述符,设计了一种用于区分这两类化合物的成玻璃能力预测模型。总共,16 种化合物中有 10 种被实验确定为良好的成玻璃化合物,而 PLS-DA 模型仅使用四个分子描述符正确分类了 15 种化合物。对外部测试集的预测准确率为 75%,因此,所开发的 PLS-DA 模型可用于鉴定具有设计为无定形制剂潜力的化合物。该模型表明,具有低苯环数,低分子对称性,支化碳骨架和电负性原子的较大分子具有形成玻璃的能力。总之,我们已经开发出一种可预测,透明且可解释的计算模型,用于鉴定具有成玻璃能力的药物分子。该模型允许在药物开发的早期过程中评估无定形化作为制剂策略,并可在化合物合成之前应用。