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一种用于筛选神经突孢霉基因敲除突变体的方法,该方法基于生长速度依赖性分支密度。

A screen for Neurospora knockout mutants displaying growth rate dependent branch density.

机构信息

Department of Biology, Neils Science Centre, Valparaiso University, 1610 Campus Drive East, Valparaiso, IN 46383, USA.

出版信息

Fungal Biol. 2011 Mar;115(3):296-301. doi: 10.1016/j.funbio.2010.12.015. Epub 2011 Jan 13.

Abstract

Branch density (the spatial distribution of branch initiation points along a growing hypha) in wild-type Neurospora has been shown to remain constant at different growth rates due to a hypothesized system which compensates for hyphal growth rate. Here we report the results of a survey of the Neurospora knockout library for mutants affecting this proposed growth rate compensation system. The mutants identified fail to maintain branching homeostasis at different growth rates, thus showing growth rate-dependent branch density. The gene functions highlighted by this screen are diverse with several emerging themes including: ubiquitin-binding proteins, kinases, metal binding/metal metabolism proteins, reactive oxygen species (ROS) control proteins, and clock-associated/clock-controlled proteins. Other than their common influence on branch density homeostasis, the relationships between these gene functions and how they interact to influence branching are unclear.

摘要

野生型 Neurospora 中的分支密度(沿生长菌丝的分支起始点的空间分布)已被证明在不同的生长速率下保持不变,这是由于假设的补偿菌丝生长速率的系统。在这里,我们报告了对影响这一拟议生长速率补偿系统的 Neurospora 敲除文库进行的一项调查的结果。鉴定出的突变体无法在不同的生长速率下维持分支的内稳态,因此表现出生长速率依赖性的分支密度。该筛选突出显示的基因功能多种多样,包括泛素结合蛋白、激酶、金属结合/金属代谢蛋白、活性氧(ROS)控制蛋白和与时钟相关/时钟控制的蛋白。除了对分支密度内稳态的共同影响外,这些基因功能之间的关系以及它们如何相互作用影响分支尚不清楚。

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