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通过全基因组 SNP 连锁不平衡作图寻找与辐射相关脑膜瘤的遗传易感性。

Search for inherited susceptibility to radiation-associated meningioma by genomewide SNP linkage disequilibrium mapping.

机构信息

Section of Cancer Genetics, Institute of Cancer Research, Sutton, Surrey, UK.

出版信息

Br J Cancer. 2011 Mar 15;104(6):1049-54. doi: 10.1038/bjc.2011.61. Epub 2011 Mar 1.

Abstract

BACKGROUND

Exposure to ionising radiation is a well-established risk factor for multiple types of tumours, including malignant brain tumours. In the 1950s, radiotherapy was used to treat Tinea Capitis (TC) in thousands of children, mostly of North-African and Middle Eastern origin, during the mass migration to Israel. The over-representation of radiation-associated meningioma (RAM) and other cancers in specific families provide support for inherited genetic susceptibility to radiation-induced cancer.

METHODS

To test this hypothesis, we genotyped 15 families segregating RAM using high-density single-nucleotide polymorphism (SNP) arrays. Using the family-based association test (FBAT) programme, we tested each polymorphism and haplotype for an association with RAM.

RESULTS

The strongest haplotype associations were attained at 18q21.1 (P=7.5 × 10(-5)), 18q21.31 (P=2.8 × 10(-5)) and 10q21.3 (P=1.6 × 10(-4)). Although associations were not formally statistically significant after adjustment for multiple testing, the 18q21.1 and 10q21.3 associations provide support for a variation in PIAS2, KATNAL2, TCEB3C, TCEB3CL and CTNNA3 genes as risk factors for RAM.

CONCLUSION

These findings suggest that any underlying genetic susceptibility to RAM is likely to be mediated through the co-inheritance of multiple risk alleles rather than a single major gene locus determining radiosensitivity.

摘要

背景

电离辐射暴露是多种肿瘤的一个明确的危险因素,包括恶性脑肿瘤。20 世纪 50 年代,在大量北非和中东移民到以色列期间,放疗被用于治疗数千名儿童的头癣(TC)。在特定家族中,辐射相关脑膜瘤(RAM)和其他癌症的过度表现支持了对辐射诱导癌症的遗传易感性。

方法

为了验证这一假设,我们使用高密度单核苷酸多态性(SNP)阵列对 15 个分离 RAM 的家族进行了基因分型。使用基于家庭的关联测试(FBAT)程序,我们测试了每个多态性和单倍型与 RAM 的关联。

结果

在 18q21.1(P=7.5×10(-5))、18q21.31(P=2.8×10(-5))和 10q21.3(P=1.6×10(-4))处获得了最强的单倍型关联。尽管在进行多次测试调整后,关联没有正式达到统计学意义,但 18q21.1 和 10q21.3 的关联为 PIAS2、KATNAL2、TCEB3C、TCEB3CL 和 CTNNA3 基因的变异作为 RAM 的风险因素提供了支持。

结论

这些发现表明,任何潜在的 RAM 遗传易感性都可能是通过多个风险等位基因的共同遗传,而不是单个主要基因座决定放射敏感性来介导的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a42/3065289/88a8b5ee85e4/bjc201161f1.jpg

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