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辐射相关性脑膜瘤的遗传易感性研究。

Examination of Genetic Susceptibility in Radiation-Associated Meningioma.

机构信息

Clinical Genetics Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Rockville, Maryland.

Frederick National Laboratory for Cancer Research, Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Rockville, Maryland.

出版信息

Radiat Res. 2022 Jul 1;198(1):81-88. doi: 10.1667/RADE-21-00035.1.

DOI:10.1667/RADE-21-00035.1
PMID:35405740
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9326809/
Abstract

Previous epidemiological studies have demonstrated elevated susceptibility to ionizing radiation in some families, thus suggesting the presence of genetic components that conferred increased rate of radiation-associated meningioma (RAM). In this study, we exome-sequenced and investigated the segregation pattern of rare deleterious variants in 11 RAM pedigrees. In addition, we performed a rare-variant association analysis in 92 unrelated familial cases of RAM that were ancestry-matched with 88 meningioma-free controls. In the pedigree analysis, we found that each family carried mostly a unique set of rare deleterious variants. A follow-up pathway analysis of the union of the genes that segregated within each of the 11 pedigrees identified a single statistically significant (q value = 7.90E-04) "ECM receptor interaction" set. In the case-control association analysis, we observed no statistically significant variants or genes after multiple testing correction; however, examination of ontological categories of the genes that associated with RAM at nominal P values <0.01 identified biologically relevant pathways such as DNA repair, cell cycle and apoptosis. These results suggest that it is unlikely that a small number of highly penetrant genes are involved in the pathogenesis of RAM. Substantially larger studies are needed to identify genetic risk variants and genes in RAM.

摘要

先前的流行病学研究表明,某些家族对电离辐射的敏感性增加,这表明存在遗传因素,导致辐射相关脑膜瘤(RAM)的发生率增加。在这项研究中,我们对 11 个 RAM 家系进行了外显子组测序,并研究了罕见有害变异的分离模式。此外,我们对 92 个与 88 个无脑膜瘤对照相匹配的 RAM 家族性病例进行了罕见变异关联分析。在家系分析中,我们发现每个家系携带的大多数是一组独特的罕见有害变异。对 11 个家系中每个家系内分离的基因进行联合的后续途径分析,确定了一个单一的具有统计学意义的(q 值=7.90E-04)“ECM 受体相互作用”集。在病例对照关联分析中,我们在多重检验校正后没有观察到具有统计学意义的变异或基因;然而,对在名义 P 值 <0.01 与 RAM 相关的基因的本体论类别进行检查,确定了 DNA 修复、细胞周期和细胞凋亡等具有生物学意义的途径。这些结果表明,RAM 的发病机制不太可能涉及少数高外显率的基因。需要进行更大规模的研究,以确定 RAM 中的遗传风险变异和基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab4f/9326809/5140e3a8abd7/nihms-1822831-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab4f/9326809/bed67eeda2ce/nihms-1822831-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab4f/9326809/5140e3a8abd7/nihms-1822831-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab4f/9326809/bed67eeda2ce/nihms-1822831-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab4f/9326809/5140e3a8abd7/nihms-1822831-f0002.jpg

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