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Dicer1 缺失后哺乳动物细胞中 microRNA 周转的分析。

Analysis of microRNA turnover in mammalian cells following Dicer1 ablation.

机构信息

Centre for Cancer Research, Centre for Innate Immunity and Infectious Diseases, Monash Institute of Medical Research, Monash University, Clayton, Victoria 3168, Australia.

出版信息

Nucleic Acids Res. 2011 Jul;39(13):5692-703. doi: 10.1093/nar/gkr148. Epub 2011 Mar 29.

Abstract

Although microRNAs (miRNAs) are key regulators of gene expression, little is known of their overall persistence in the cell following processing. Characterization of such persistence is key to the full appreciation of their regulatory roles. Accordingly, we measured miRNA decay rates in mouse embryonic fibroblasts following loss of Dicer1 enzymatic activity. The results confirm the inherent stability of miRNAs, the intracellular levels of which were mostly affected by cell division. Using the decay rates of a panel of six miRNAs representative of the global trend of miRNA decay, we establish a mathematical model of miRNA turnover and determine an average miRNA half-life of 119 h (i.e. ∼5 days). In addition, we demonstrate that select miRNAs turnover more rapidly than others. This study constitutes, to our knowledge, the first in-depth characterization of miRNA decay in mammalian cells. Our findings indicate that miRNAs are up to 10× more stable than messenger RNA and support the existence of novel mechanism(s) controlling selective miRNA cellular concentration and function.

摘要

尽管 microRNAs(miRNAs)是基因表达的关键调节因子,但人们对其在加工后在细胞中的整体持久性知之甚少。对这种持久性进行特征描述对于充分了解它们的调节作用至关重要。因此,我们在失去 Dicer1 酶活性后测量了小鼠胚胎成纤维细胞中 miRNA 的衰减率。结果证实了 miRNAs 的固有稳定性,细胞内水平主要受细胞分裂的影响。使用代表 miRNA 衰减总体趋势的六个 miRNA 的衰减率面板,我们建立了 miRNA 周转率的数学模型,并确定了 miRNA 的平均半衰期为 119 小时(即约 5 天)。此外,我们证明了一些 miRNA 的周转率比其他 miRNA 更快。就我们所知,这项研究首次对哺乳动物细胞中 miRNA 的衰减进行了深入表征。我们的研究结果表明,miRNAs 的稳定性比信使 RNA 高 10 倍左右,这支持了控制选择性 miRNA 细胞浓度和功能的新机制(s)的存在。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2088/3141258/7cdf11942bc3/gkr148f1.jpg

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