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血红蛋白结合自旋标记的残余运动与蛋白质动力学:旋转相关时间的粘度依赖性

Residual motion of hemoglobin-bound spin labels and protein dynamics: viscosity dependence of the rotational correlation times.

作者信息

Steinhoff H J

机构信息

Institut für Biophysik, Ruhr-Universität Bochum, Federal Republic of Germany.

出版信息

Eur Biophys J. 1990;18(1):57-62. doi: 10.1007/BF00185420.

Abstract

The residual motion of spin labels bound to cysteine beta 93 and to lysines of methemoglobin has been studied by electron paramagnetic resonance spectroscopy. To separate the influences of the solvent and the protein environment of the label fluctuations, the correlation times, tau, were analyzed as a function of temperature for fixed solvent viscosities, eta. Results show that over a wide range of viscosity the dependence of tau on eta may be empirically described by a power law tau approximately eta kappa. The exponent kappa depends strongly on the location of the label on the protein surface. If one regards the spin labels as artificial amino acid side chains, characteristic values of correlation times and amplitudes of the rotational motion at the surface can be given. For eta = 1 cP and T = 297 K the correlation time of the labels bound to lysines is found to be tau = 9.10(-10) S and the rotational diffusion is nearly isotropic. The spin label bound to cysteine beta 93 occupies a protein pocket, its rotational motion is therefore restricted. The correlation time of the label motion within a limited motion cone of semi angle theta = 30 degrees +/- 3 degrees is found to be tau = 1.3.10(-9) S for eta = 1 cP and T = 297 K.

摘要

通过电子顺磁共振光谱研究了与半胱氨酸β93和高铁血红蛋白赖氨酸结合的自旋标记物的残余运动。为了分离溶剂和标记物波动的蛋白质环境的影响,在固定溶剂粘度η的情况下,将相关时间τ作为温度的函数进行分析。结果表明,在很宽的粘度范围内,τ对η的依赖性可以用幂律τ≈ηκ进行经验描述。指数κ强烈依赖于标记物在蛋白质表面的位置。如果将自旋标记物视为人工氨基酸侧链,则可以给出表面旋转运动的相关时间和幅度的特征值。对于η = 1 cP和T = 297 K,发现与赖氨酸结合的标记物的相关时间为τ = 9×10⁻¹⁰ s,并且旋转扩散几乎是各向同性的。与半胱氨酸β93结合的自旋标记物占据一个蛋白质口袋,因此其旋转运动受到限制。对于η = 1 cP和T = 297 K,发现在半角θ = 30°±3°的有限运动锥内标记物运动的相关时间为τ = 1.3×10⁻⁹ s。

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